holodeck 0.1.0

Modern NGS read simulator
Documentation 
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#!/usr/bin/env bash
set -euo pipefail

echo "Running pre-commit checks..."

echo "  Checking formatting..."
cargo ci-fmt
echo "  Formatting OK."

echo "  Running clippy..."
cargo ci-lint
echo "  Clippy OK."

# Optionally run tests; set HOLODECK_PRECOMMIT_TEST=1 to enable.
if [[ "${HOLODECK_PRECOMMIT_TEST:-0}" == "1" ]]; then
    echo "  Running tests..."
    cargo ci-test
    echo "  Tests OK."
fi

echo "Pre-commit checks passed."