helicase 0.1.1

SIMD-accelerated library for FASTA/FASTQ parsing and bitpacking
Documentation
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[package]
edition = "2024"
name = "helicase"
version = "0.1.1"
authors = [
    "Igor Martayan",
    "Charles Paperman",
]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "SIMD-accelerated library for FASTA/FASTQ parsing and bitpacking"
documentation = "https://docs.rs/helicase"
readme = "README.md"
keywords = [
    "bioinformatics",
    "fasta",
    "fastq",
    "bitpacking",
    "simd",
]
categories = ["science::bioinformatics"]
license = "MIT"
repository = "https://github.com/imartayan/helicase"

[package.metadata.docs.rs]
all-features = true

[features]
bz2 = ["deko/bzip2"]
default = [
    "gz",
    "zstd",
]
gz = [
    "deko/flate2",
    "flate2",
]
no-pdep = []
xz = ["deko/xz"]
zstd = ["deko/zstd"]

[lib]
name = "helicase"
path = "src/lib.rs"

[[example]]
name = "fq_to_fa"
path = "examples/fq_to_fa.rs"

[[example]]
name = "histogram"
path = "examples/histogram.rs"

[[example]]
name = "minimal"
path = "examples/minimal.rs"

[[example]]
name = "packed"
path = "examples/packed.rs"
required-features = ["packed-seq"]

[dependencies.deko]
version = "0.6"
default-features = false

[dependencies.flate2]
version = "1.1"
features = ["zlib-rs"]
optional = true

[dependencies.memchr]
version = "2.8"

[dependencies.memmap2]
version = "0.9"

[dependencies.packed-seq]
version = "4.4"
optional = true
default-features = false

[dependencies.paraseq]
version = "0.4"
optional = true
default-features = false