gzippy 0.8.0

The fastest parallel gzip. Drop-in replacement for gzip and pigz, and a Rust library.
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
//! Decompression Routing Oracle
//!
//! Verifies that every file type (BGZF, multi-member, single-member, zlib)
//! is correctly detected, routed to the right decompression path, and produces
//! byte-identical output regardless of thread count.
//!
//! Layer 0: FileOracle — creates known test files of each type
//! Layer 1: Format Detection — verify has_bgzf_markers, is_likely_multi_member
//! Layer 2: Path Correctness — each path produces valid output
//! Layer 3: Output Identity — same output regardless of path or thread count

#[cfg(test)]
mod tests {
    use crate::compress::parallel::{compress_single_member, GzipHeaderInfo};
    use crate::decompress::format::has_bgzf_markers;
    use std::io::Write;

    // =========================================================================
    // Layer 0: FileOracle — create known test files
    // =========================================================================

    struct FileOracle {
        original: Vec<u8>,
        single_member_gz: Vec<u8>,
        multi_member_gz: Vec<u8>,
        bgzf_gz: Vec<u8>,
    }

    impl FileOracle {
        fn new(size: usize) -> Self {
            let original = make_test_data(size);

            let single_member_gz = compress_single_member_gzip(&original);
            let multi_member_gz = compress_multi_member_gzip(&original);
            let bgzf_gz = compress_bgzf_gzip(&original);

            Self {
                original,
                single_member_gz,
                multi_member_gz,
                bgzf_gz,
            }
        }
    }

    fn make_test_data(size: usize) -> Vec<u8> {
        let mut data = Vec::with_capacity(size);
        let mut rng: u64 = 0xcafebabe;
        let phrases: &[&[u8]] = &[
            b"the quick brown fox jumps over the lazy dog. ",
            b"pack my box with five dozen liquor jugs! ",
            b"0123456789 abcdefghijklmnopqrstuvwxyz ABCDEFGHIJKLMNOP\n",
        ];
        while data.len() < size {
            rng = rng.wrapping_mul(6364136223846793005).wrapping_add(1);
            if (rng >> 32) % 5 < 2 {
                data.push((rng >> 16) as u8);
            } else {
                let phrase = phrases[((rng >> 24) as usize) % phrases.len()];
                let remaining = size - data.len();
                data.extend_from_slice(&phrase[..remaining.min(phrase.len())]);
            }
        }
        data.truncate(size);
        data
    }

    /// Single-member gzip (what `gzip` produces).
    fn compress_single_member_gzip(data: &[u8]) -> Vec<u8> {
        let mut encoder = flate2::write::GzEncoder::new(Vec::new(), flate2::Compression::default());
        encoder.write_all(data).unwrap();
        encoder.finish().unwrap()
    }

    /// Multi-member gzip (what `pigz` produces — concatenated gzip members).
    fn compress_multi_member_gzip(data: &[u8]) -> Vec<u8> {
        let chunk_size = 256 * 1024;
        let mut output = Vec::new();
        for chunk in data.chunks(chunk_size) {
            let mut encoder =
                flate2::write::GzEncoder::new(Vec::new(), flate2::Compression::default());
            encoder.write_all(chunk).unwrap();
            output.extend_from_slice(&encoder.finish().unwrap());
        }
        output
    }

    /// BGZF gzip (what gzippy produces — blocks with FEXTRA markers).
    fn compress_bgzf_gzip(data: &[u8]) -> Vec<u8> {
        let mut output = Vec::new();
        let header = GzipHeaderInfo::default();
        compress_single_member(&mut output, data, 1, &header).unwrap();
        output
    }

    /// Decompress using flate2 as a reference implementation.
    fn decompress_reference(gz_data: &[u8]) -> Vec<u8> {
        use flate2::read::MultiGzDecoder;
        use std::io::Read;
        let mut decoder = MultiGzDecoder::new(gz_data);
        let mut output = Vec::new();
        decoder.read_to_end(&mut output).unwrap();
        output
    }

    // =========================================================================
    // Layer 0 tests: Oracle self-consistency
    // =========================================================================

    #[test]
    fn test_file_oracle_roundtrip() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        let from_single = decompress_reference(&oracle.single_member_gz);
        let from_multi = decompress_reference(&oracle.multi_member_gz);
        let from_bgzf = decompress_reference(&oracle.bgzf_gz);

        assert_eq!(
            from_single, oracle.original,
            "single-member roundtrip failed"
        );
        assert_eq!(from_multi, oracle.original, "multi-member roundtrip failed");
        assert_eq!(from_bgzf, oracle.original, "bgzf roundtrip failed");

        eprintln!(
            "oracle: {}B original, single={}B, multi={}B, bgzf={}B",
            oracle.original.len(),
            oracle.single_member_gz.len(),
            oracle.multi_member_gz.len(),
            oracle.bgzf_gz.len()
        );
    }

    // =========================================================================
    // Layer 1: Format Detection
    // =========================================================================

    #[test]
    fn test_detect_bgzf() {
        let oracle = FileOracle::new(512 * 1024);

        assert!(
            has_bgzf_markers(&oracle.bgzf_gz),
            "BGZF data should be detected as BGZF"
        );
        assert!(
            !has_bgzf_markers(&oracle.single_member_gz),
            "single-member should NOT be detected as BGZF"
        );
        // Multi-member from flate2 won't have BGZF markers
        assert!(
            !has_bgzf_markers(&oracle.multi_member_gz),
            "multi-member (flate2) should NOT be detected as BGZF"
        );
    }

    #[test]
    fn test_detect_multi_member() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        let multi = crate::decompress::format::is_likely_multi_member(&oracle.multi_member_gz);
        let single = crate::decompress::format::is_likely_multi_member(&oracle.single_member_gz);
        let bgzf = crate::decompress::format::is_likely_multi_member(&oracle.bgzf_gz);

        eprintln!("detection: multi={} single={} bgzf={}", multi, single, bgzf);

        assert!(multi, "multi-member should be detected as multi-member");
        assert!(
            !single,
            "single-member should NOT be detected as multi-member"
        );
    }

    // =========================================================================
    // Layer 2: Path Correctness — each decompression path produces valid output
    // =========================================================================

    #[test]
    fn test_bgzf_path_correctness() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        // T1
        let output_t1 =
            crate::decompress::bgzf::decompress_bgzf_parallel_to_vec(&oracle.bgzf_gz, 1).unwrap();
        assert_eq!(
            output_t1, oracle.original,
            "BGZF T1 output doesn't match original"
        );

        // T4
        let output_t4 =
            crate::decompress::bgzf::decompress_bgzf_parallel_to_vec(&oracle.bgzf_gz, 4).unwrap();
        assert_eq!(
            output_t4, oracle.original,
            "BGZF T4 output doesn't match original"
        );

        eprintln!("BGZF path: T1 and T4 produce identical correct output");
    }

    #[test]
    fn test_multi_member_path_correctness() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        // Parallel path
        let output_par = crate::decompress::bgzf::decompress_multi_member_parallel_to_vec(
            &oracle.multi_member_gz,
            4,
        )
        .unwrap();
        assert_eq!(
            output_par, oracle.original,
            "multi-member parallel output doesn't match original"
        );

        // Sequential path
        let mut output_seq = Vec::new();
        crate::decompress::decompress_multi_member_sequential(
            &oracle.multi_member_gz,
            &mut output_seq,
        )
        .unwrap();
        assert_eq!(
            output_seq, oracle.original,
            "multi-member sequential output doesn't match original"
        );

        eprintln!("multi-member path: parallel and sequential produce identical correct output");
    }

    #[test]
    fn test_single_member_path_correctness() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        // Sequential fallback
        let mut output = Vec::new();
        crate::decompress::decompress_single_member_libdeflate(
            &oracle.single_member_gz,
            &mut output,
        )
        .unwrap();
        assert_eq!(
            output, oracle.original,
            "single-member libdeflate output doesn't match original"
        );

        eprintln!("single-member path: libdeflate produces correct output");
    }

    // =========================================================================
    // Production routing: a single-member input large enough to clear the
    // 10 MiB parallel-path gate must produce correct output via
    // `decompress_single_member`. On x86_64 this exercises the parallel ISA-L
    // `inflatePrime` path wired in at v0.3.0; on arm64 it exercises libdeflate.
    // Either way, bytes must match.
    // =========================================================================

    #[test]
    fn test_single_member_routing_multithread() {
        // Use mostly-random data so it doesn't compress past the 10 MiB gate.
        // Target: ~14 MiB compressed.
        let original = make_low_entropy_data(24 * 1024 * 1024);
        let compressed = compress_single_member_gzip(&original);
        assert!(
            compressed.len() > 10 * 1024 * 1024,
            "test input must exceed parallel-path 10 MiB gate (got {} bytes)",
            compressed.len()
        );

        let mut output = Vec::new();
        crate::decompress::decompress_single_member(&compressed, &mut output, 4).unwrap();
        assert_eq!(
            output, original,
            "decompress_single_member(T=4) output mismatch — production routing broken"
        );
    }

    /// 60% random / 40% short repetition — compresses to ~60% of original.
    /// Sized to clear the 10 MiB parallel-path gate without being huge.
    fn make_low_entropy_data(size: usize) -> Vec<u8> {
        let mut data = Vec::with_capacity(size);
        let mut rng: u64 = 0xfeedface;
        while data.len() < size {
            rng = rng.wrapping_mul(6364136223846793005).wrapping_add(1);
            if (rng >> 32) % 5 < 3 {
                data.push((rng >> 16) as u8);
            } else {
                let byte = ((rng >> 24) % 26 + b'a' as u64) as u8;
                let repeat = ((rng >> 40) % 8 + 2) as usize;
                for _ in 0..repeat.min(size - data.len()) {
                    data.push(byte);
                }
            }
        }
        data.truncate(size);
        data
    }

    // =========================================================================
    // Layer 3: Output Identity — same output regardless of thread count
    // =========================================================================

    #[test]
    fn test_bgzf_thread_independence() {
        let oracle = FileOracle::new(4 * 1024 * 1024);

        let outputs: Vec<Vec<u8>> = (1..=8)
            .map(|t| {
                crate::decompress::bgzf::decompress_bgzf_parallel_to_vec(&oracle.bgzf_gz, t)
                    .unwrap()
            })
            .collect();

        for (i, output) in outputs.iter().enumerate() {
            assert_eq!(
                output,
                &oracle.original,
                "BGZF T{} output differs from original",
                i + 1
            );
        }

        // Verify all outputs are identical to each other
        for i in 1..outputs.len() {
            assert_eq!(
                outputs[0],
                outputs[i],
                "BGZF T1 and T{} produce different output",
                i + 1
            );
        }

        eprintln!("BGZF: T1-T8 all produce identical output");
    }

    #[test]
    fn test_cross_format_output_identity() {
        let oracle = FileOracle::new(2 * 1024 * 1024);

        let from_bgzf =
            crate::decompress::bgzf::decompress_bgzf_parallel_to_vec(&oracle.bgzf_gz, 4).unwrap();
        let from_multi = crate::decompress::bgzf::decompress_multi_member_parallel_to_vec(
            &oracle.multi_member_gz,
            4,
        )
        .unwrap();

        let mut from_single = Vec::new();
        crate::decompress::decompress_single_member_libdeflate(
            &oracle.single_member_gz,
            &mut from_single,
        )
        .unwrap();

        assert_eq!(
            from_bgzf, oracle.original,
            "BGZF decompressed differs from original"
        );
        assert_eq!(
            from_multi, oracle.original,
            "multi-member decompressed differs from original"
        );
        assert_eq!(
            from_single, oracle.original,
            "single-member decompressed differs from original"
        );

        eprintln!("all three formats produce byte-identical output from the same input");
    }

    // =========================================================================
    // Layer 1b: classify_gzip routing table assertions
    //
    // These tests are the canonical check that the routing table in
    // decompression.rs::classify_gzip matches the actual file formats.
    // If routing changes, update CLAUDE.md first, then fix these tests.
    // =========================================================================

    #[test]
    fn test_classify_gzippy_parallel() {
        let oracle = FileOracle::new(512 * 1024);
        // gzippy-parallel output ("GZ" FEXTRA) → GzippyParallel regardless of threads
        assert_eq!(
            crate::decompress::classify_gzip(&oracle.bgzf_gz, 1),
            crate::decompress::DecodePath::GzippyParallel,
            "gzippy-parallel T1 should classify as GzippyParallel"
        );
        assert_eq!(
            crate::decompress::classify_gzip(&oracle.bgzf_gz, 4),
            crate::decompress::DecodePath::GzippyParallel,
            "gzippy-parallel T4 should classify as GzippyParallel"
        );
    }

    #[test]
    fn test_classify_multi_member() {
        let oracle = FileOracle::new(2 * 1024 * 1024);
        // T1 multi-member → sequential
        assert_eq!(
            crate::decompress::classify_gzip(&oracle.multi_member_gz, 1),
            crate::decompress::DecodePath::MultiMemberSeq,
            "multi-member T1 should classify as MultiMemberSeq"
        );
        // T4 multi-member → parallel
        assert_eq!(
            crate::decompress::classify_gzip(&oracle.multi_member_gz, 4),
            crate::decompress::DecodePath::MultiMemberPar,
            "multi-member T4 should classify as MultiMemberPar"
        );
    }

    #[test]
    fn test_classify_single_member() {
        use crate::decompress::{classify_gzip, DecodePath};
        let oracle = FileOracle::new(512 * 1024);
        let path = classify_gzip(&oracle.single_member_gz, 4);
        // Single-member must route to one of the three single-member paths.
        // The exact path depends on whether ISA-L is available on this machine.
        assert!(
            matches!(
                path,
                DecodePath::IsalSingle | DecodePath::StreamingSingle | DecodePath::LibdeflateSingle
            ),
            "single-member should classify as a single-member path, got {:?}",
            path
        );
    }
}