[[bin]]
name = "gxf2bed"
path = "src/main.rs"
[dependencies.clap]
features = ["derive"]
version = "4.0"
[dependencies.colored]
version = "3.0.0"
[dependencies.genepred]
features = ["rayon", "mmap", "gzip", "zstd", "bz2"]
version = "0.0.8"
[dependencies.hashbrown]
features = ["rayon"]
version = ">0.12"
[dependencies.indoc]
version = "2.0"
[dependencies.libc]
version = "0.2.151"
[dependencies.log]
version = "0.4.14"
[dependencies.num_cpus]
version = "1.16.0"
[dependencies.rayon]
version = "1.11.0"
[dependencies.simple_logger]
version = "5.0.0"
[dependencies.tempfile]
version = "3.23.0"
[dependencies.thiserror]
version = "2.0"
[dev-dependencies.flate2]
default-features = false
features = ["rust_backend"]
version = "1.0"
[lib]
name = "gxf2bed"
path = "src/lib.rs"
[package]
authors = ["alejandrogzi <alejandrxgzi@gmail.com>"]
autobenches = false
autobins = false
autoexamples = false
autolib = false
autotests = false
build = false
categories = ["command-line-utilities", "science"]
default-run = "gxf2bed"
description = "fastest GTF/GFF-to-BED converter chilling around"
edition = "2021"
homepage = "https://github.com/alejandrogzi/gxf2bed"
keywords = ["bed", "gtf", "gff", "cli", "convert"]
license = "MIT"
name = "gxf2bed"
readme = "README.md"
repository = "https://github.com/alejandrogzi/gxf2bed"
version = "0.3.2"
[profile.release]
codegen-units = 1
lto = true
opt-level = 3
[[test]]
name = "convert_gff"
path = "tests/convert_gff.rs"
[[test]]
name = "convert_gtf"
path = "tests/convert_gtf.rs"
[[test]]
name = "convert_gzip"
path = "tests/convert_gzip.rs"
[[test]]
name = "detect"
path = "tests/detect.rs"