gwseq-io 0.2.0

Rust library for processing bigWig, bigBed, BAM and HiC files
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
//! Genomic coordinates: chromosome maps, loci, bins, strands.
//!
//! This layer is **behaviour**, not implementation: the resolution rules, the
//! four legal ways to spell a set of loci, and the binning arithmetic. Every
//! reader in the crate goes through it, so a change here changes all four
//! formats at once.

mod bins;
mod chr;
mod locs;

pub use bins::{BinMode, BinPlan, BinStats, Reduce, ValueStats};
pub use chr::{ChrEntry, ChrMap};
pub use locs::{IndexedLoc, IndexedLocs, LocBatch, Locs, Strand};