grepq 1.6.6

quickly filter fastq files
Documentation 
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name: Linux-CI

on:
  push:
    branches: [main, dev]
  pull_request:
    branches: [main]

env:
  CARGO_TERM_COLOR: always

jobs:
  test:
    runs-on: ubuntu-latest

    steps:
      - name: Checkout code
        uses: actions/checkout@v4

      - name: Set up Rust toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          override: true

      - name: Install system dependencies
        run: |
          sudo apt-get update
          sudo apt-get install -y libsqlite3-dev libzstd-dev pkg-config

      - name: Install hyperfine
        run: cargo install hyperfine

      - name: Set up Node.js for bats
        uses: actions/setup-node@v4
        with:
          node-version: "20" # Or any LTS version

      - name: Install bats-core from source
        run: |
          git clone https://github.com/bats-core/bats-core.git
          cd bats-core
          sudo ./install.sh /usr/local

      - name: Build grepq
        run: cargo build --release

      - name: Run tests
        run: |
          cd test
          ./run_tests.sh