graphrag-core 0.1.0

Core portable library for GraphRAG - works on native and WASM
Documentation
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# Leiden Community Detection Integration Guide

## Overview

Leiden algorithm has been successfully integrated into `graphrag-core`. This provides **hierarchical community detection with guaranteed well-connected communities**, improving upon the Louvain algorithm.

## Implementation Status

✅ **COMPLETED** - Core modules compiled and tested:
- `graph::leiden` - Leiden algorithm with refinement phase
- Full TOML configuration support
- Integration with existing `graphrag-core` graph module
- **NEW**: KnowledgeGraph → Leiden conversion (`to_leiden_graph()`)
- **NEW**: Entity metadata enrichment for communities
- **NEW**: Hierarchical bottom-up summarization system
- **NEW**: Direct hierarchical clustering on entity graphs

## Architecture

### Key Components

1. **LeidenCommunityDetector**
   - 3-phase algorithm:
     1. **Local moving**: Greedy modularity optimization
     2. **Refinement phase**: Splits poorly connected communities (KEY improvement over Louvain)
     3. **Aggregation**: Creates hierarchical structure
   - Guarantees well-connected communities

2. **HierarchicalCommunities**
   - Multi-level community structure
   - Parent-child relationships between levels
   - **Entity metadata mapping**: Links community nodes to full entity information
   - **Automatic summarization**: Extractive and LLM-ready summaries for each community
   - **Bottom-up summary generation**: Builds hierarchical summaries from finest to coarsest level
   - Helper methods: `get_community_entities()`, `get_entities_metadata()`, `get_community_stats()`

3. **LeidenConfig**
   - Full configuration control
   - Reproducible results with seed
   - Adjustable resolution for community granularity

## Usage

### Enable Feature

```toml
[dependencies]
graphrag-core = { path = "../graphrag-core", features = ["leiden"] }
```

### Basic Example

```rust
use graphrag_core::{
    LeidenCommunityDetector, LeidenConfig, HierarchicalCommunities,
};
use petgraph::graph::Graph;
use petgraph::Undirected;

// 1. Configure Leiden algorithm
let config = LeidenConfig {
    max_cluster_size: 10,
    use_lcc: true,              // Use largest connected component
    seed: Some(42),             // Reproducibility
    resolution: 1.0,            // Modularity resolution
    max_levels: 5,              // Hierarchical depth
    min_improvement: 0.001,
};

// 2. Create detector
let detector = LeidenCommunityDetector::new(config);

// 3. Detect communities in graph
let graph: Graph<String, f32, Undirected> = /* your graph */;
let communities = detector.detect_communities(&graph)?;

// 4. Access results
for (level, community_map) in &communities.levels {
    println!("Level {}: {} communities", level,
        community_map.values().collect::<std::collections::HashSet<_>>().len()
    );
}
```

### Hierarchical GraphRAG on Entity Graphs

**NEW**: Direct hierarchical clustering on your KnowledgeGraph with entity metadata enrichment:

```rust
use graphrag_core::{KnowledgeGraph, graph::LeidenConfig};

// 1. Build your knowledge graph
let mut graph = KnowledgeGraph::new();
// ... add documents, entities, relationships ...

// 2. Configure hierarchical clustering
let config = LeidenConfig {
    max_cluster_size: 10,
    resolution: 1.0,
    max_levels: 5,
    ..Default::default()
};

// 3. Detect hierarchical communities directly on entity graph
let communities = graph.detect_hierarchical_communities(config)?;

// 4. Access entity metadata for communities
let level_0_entities = communities.get_community_entities(&graph.to_leiden_graph(), 0, 0);
println!("Community 0 at level 0 contains: {:?}", level_0_entities);

// 5. Get detailed entity metadata
if let Some(metadata_list) = communities.get_entities_metadata(&level_0_entities) {
    for metadata in metadata_list {
        println!("Entity: {} ({}), confidence: {:.2}, mentions: {}",
            metadata.name, metadata.entity_type,
            metadata.confidence, metadata.mention_count
        );
    }
}

// 6. Generate community statistics
let (entity_count, avg_confidence, types) =
    communities.get_community_stats(&level_0_entities).unwrap();
println!("Community has {} entities, avg confidence: {:.2}",
    entity_count, avg_confidence);
println!("Entity types: {:?}", types);

// 7. Generate extractive summary
let summary = communities.generate_community_summary(&level_0_entities, 5);
println!("Community summary: {}", summary);

// 8. Generate hierarchical summaries (bottom-up)
let mut communities = communities;
communities.generate_hierarchical_summaries(&graph.to_leiden_graph(), 5);
println!("Level 0 summaries: {:?}", communities.summaries);
```

### TOML Configuration

```toml
[enhancements.leiden]
enabled = true                     # Enable Leiden algorithm
max_cluster_size = 10              # Maximum nodes per community
use_lcc = true                     # Use only largest connected component
seed = 42                          # Random seed for reproducibility
resolution = 1.0                   # Modularity resolution (0.1-2.0)
max_levels = 5                     # Maximum hierarchical depth
min_improvement = 0.001            # Minimum improvement threshold

# Hierarchical GraphRAG features
enable_hierarchical = true         # Enable hierarchical clustering on entity graphs
generate_summaries = true          # Auto-generate community summaries
max_summary_length = 5             # Maximum entities/sentences per summary
use_extractive_summary = true      # Use extractive (true) vs LLM-based (false)

# Adaptive Query Routing (NEW)
[enhancements.leiden.adaptive_routing]
enabled = true                     # Enable adaptive level selection
default_level = 1                  # Default level when complexity unclear
keyword_weight = 0.5               # Weight for keyword analysis (0.0-1.0)
length_weight = 0.3                # Weight for query length (0.0-1.0)
entity_weight = 0.2                # Weight for entity mentions (0.0-1.0)
```

## Configuration Parameters

### Resolution Parameter
- **Lower values (0.1-0.5)**: Larger communities, fewer clusters
- **Default (1.0)**: Balanced modularity
- **Higher values (1.5-2.0)**: Smaller, more granular communities

### Max Cluster Size
- Controls maximum nodes in a single community
- Prevents over-aggregation
- Default: 10 nodes

### Hierarchical Levels
- `max_levels`: Maximum depth of hierarchy
- Level 0 = finest granularity (individual nodes)
- Higher levels = coarser communities

### Reproducibility
- Set `seed` to a fixed value for deterministic results
- `None` = random seed each run

### Hierarchical GraphRAG Parameters (NEW)

#### `enable_hierarchical`
- **Type**: bool
- **Default**: true
- **Purpose**: Enable hierarchical clustering directly on KnowledgeGraph entities
- When true, uses `detect_hierarchical_communities()` on entity graphs

#### `generate_summaries`
- **Type**: bool
- **Default**: true
- **Purpose**: Automatically generate summaries for each community
- Generates extractive or LLM-ready summaries based on `use_extractive_summary`

#### `max_summary_length`
- **Type**: usize
- **Default**: 5
- **Purpose**: Maximum number of entities/sentences to include in summaries
- Controls summary conciseness vs completeness

#### `use_extractive_summary`
- **Type**: bool
- **Default**: true
- **Purpose**: Use extractive summarization (entity listing) vs LLM-based
- `true`: Fast, deterministic entity lists
- `false`: LLM-ready context preparation (requires async feature)

### Adaptive Routing Parameters (NEW)

#### `adaptive_routing.enabled`
- **Type**: bool
- **Default**: true
- **Purpose**: Enable automatic hierarchical level selection based on query complexity
- When enabled, queries are automatically routed to appropriate levels

#### `adaptive_routing.default_level`
- **Type**: usize
- **Default**: 1
- **Purpose**: Fallback level when query complexity cannot be determined
- Used when query analysis is inconclusive

#### `adaptive_routing.keyword_weight`
- **Type**: f32 (0.0-1.0)
- **Default**: 0.5
- **Purpose**: Weight for keyword-based complexity analysis
- Higher = more influence from broad/specific keywords

#### `adaptive_routing.length_weight`
- **Type**: f32 (0.0-1.0)
- **Default**: 0.3
- **Purpose**: Weight for query length-based analysis
- Short queries → broad, Long queries → specific

#### `adaptive_routing.entity_weight`
- **Type**: f32 (0.0-1.0)
- **Default**: 0.2
- **Purpose**: Weight for entity mention detection
- Multiple entities → specific query

**Weight Tuning Tips:**
- **Knowledge-heavy domain**: Increase `keyword_weight` (0.6-0.7)
- **Entity-focused queries**: Increase `entity_weight` (0.3-0.4)
- **Variable query length**: Increase `length_weight` (0.4-0.5)
- Weights should sum to ~1.0 for balanced analysis

## Key Differences from Louvain

| Feature | Louvain | Leiden |
|---------|---------|--------|
| **Well-connected guarantee** | ❌ No | ✅ Yes |
| **Refinement phase** | ❌ No | ✅ Yes |
| **Fragmented communities** | ⚠️ Possible | ✅ Prevented |
| **Quality** | Good | Better |
| **Speed** | Fast | Slightly slower |

### Refinement Phase (KEY Innovation)

The Leiden algorithm adds a crucial refinement step:

1. After local moving, checks each community for connectivity
2. Uses DFS to verify all nodes are reachable within community
3. **Splits** any poorly connected communities into sub-communities
4. Guarantees **well-connected** community structure

```rust
// Pseudo-code of refinement
for community in communities {
    if !is_well_connected(community) {
        sub_communities = find_connected_components(community);
        assign_new_ids(sub_communities);
    }
}
```

## Performance

Based on "From Louvain to Leiden" paper (Traag et al., 2019):

- **Quality**: 10-15% better modularity vs Louvain
- **Connectivity**: 100% well-connected communities (Louvain: ~80%)
- **Speed**: ~20% slower than Louvain, but still fast
- **Scalability**: Tested on graphs with millions of nodes

## Integration with GraphRAG Pipeline

### Community-Based Summarization (Updated)

**Method 1: Automatic Extractive Summarization**

```rust
use graphrag_core::{KnowledgeGraph, graph::LeidenConfig};

// Build knowledge graph with entities and relationships
let mut graph = KnowledgeGraph::new();
// ... add documents, extract entities, build relationships ...

// Configure with automatic summarization
let config = LeidenConfig {
    max_levels: 5,
    resolution: 1.0,
    ..Default::default()
};

// Detect communities (automatically enriched with entity metadata)
let mut communities = graph.detect_hierarchical_communities(config)?;

// Generate hierarchical summaries bottom-up
let leiden_graph = graph.to_leiden_graph();
communities.generate_hierarchical_summaries(&leiden_graph, 5);

// Access summaries by community ID
for (community_id, summary) in &communities.summaries {
    println!("Community {}: {}", community_id, summary);
}
```

**Method 2: LLM-Ready Context Preparation** (requires async feature)

```rust
#[cfg(feature = "async")]
async fn generate_llm_summaries(
    communities: &HierarchicalCommunities,
    graph: &Graph<String, f32, Undirected>,
    llm: &impl LanguageModel,
) -> Result<HashMap<usize, String>> {
    let mut summaries = HashMap::new();

    // Iterate through all communities at level 0
    for community_id in 0..100 {  // Adjust based on actual community count
        let entities = communities.get_community_entities(graph, 0, community_id);
        if entities.is_empty() {
            continue;
        }

        // Prepare LLM-ready context
        let context = communities.prepare_community_context(&entities);

        // Generate LLM summary
        let summary = llm.summarize(&context).await?;
        summaries.insert(community_id, summary);
    }

    Ok(summaries)
}
```

### Hierarchical Retrieval

**Use different levels for different query types:**

```rust
// Broad query: "What are the main themes in the document?"
// → Use higher levels (coarser communities for overview)
let high_level_communities = &communities.levels[&3];

// Specific query: "What is the relationship between entity X and Y?"
// → Use level 0 (fine-grained communities for detail)
let detailed_communities = &communities.levels[&0];

// Example retrieval function
fn retrieve_relevant_communities(
    query: &str,
    communities: &HierarchicalCommunities,
    graph: &Graph<String, f32, Undirected>,
    level: usize,
) -> Vec<String> {
    let mut results = Vec::new();

    // Get all communities at the specified level
    if let Some(level_communities) = communities.levels.get(&level) {
        for community_id in 0..100 {
            let entities = communities.get_community_entities(graph, level, community_id);
            if entities.is_empty() {
                continue;
            }

            // Check if any entity matches the query
            if entities.iter().any(|e| e.to_lowercase().contains(&query.to_lowercase())) {
                // Get summary for this community
                if let Some(summary) = communities.summaries.get(&community_id) {
                    results.push(summary.clone());
                }
            }
        }
    }

    results
}
```

### Adaptive Query Routing (NEW)

**Automatic level selection** based on query complexity analysis:

```rust
use graphrag_core::{KnowledgeGraph, graph::LeidenConfig, query::AdaptiveRoutingConfig};

// Build knowledge graph and detect communities
let mut graph = KnowledgeGraph::new();
// ... add entities, relationships ...
let mut communities = graph.detect_hierarchical_communities(LeidenConfig::default())?;

// Generate summaries
let leiden_graph = graph.to_leiden_graph();
communities.generate_hierarchical_summaries(&leiden_graph, 5);

// Configure adaptive routing
let routing_config = AdaptiveRoutingConfig {
    enabled: true,
    default_level: 1,
    keyword_weight: 0.5,
    length_weight: 0.3,
    entity_weight: 0.2,
};

// Example 1: Broad query → automatically uses high level
let broad_query = "Give me an overview of AI technologies";
let results1 = communities.adaptive_retrieve(broad_query, &leiden_graph, routing_config.clone());
// Returns: level 2-3 communities (broad overview)

// Example 2: Specific query → automatically uses low level
let specific_query = "What is the relationship between Transformers and GPT?";
let results2 = communities.adaptive_retrieve(specific_query, &leiden_graph, routing_config.clone());
// Returns: level 0 communities (detailed, specific)

// Example 3: Get detailed analysis
let (analysis, results3) = communities.adaptive_retrieve_detailed(
    "How does machine learning work?",
    &leiden_graph,
    routing_config,
);

analysis.print();
// Prints:
// Query Analysis:
//   Query: "How does machine learning work?"
//   Complexity: Medium
//   Suggested Level: 1
//   Scores:
//     - Keywords: 0.00
//     - Length: 0.00
//     - Entities: 0.30
//   Medium complexity query → using level 1 for balanced detail
```

#### How Adaptive Routing Works

The system uses a **multi-component scoring algorithm** that analyzes queries from three perspectives:

##### 1. Keyword Analysis (weight: 0.5)

Searches for broad vs specific keywords in the query:

**Broad keywords** (score: +1.0):
- "overview", "summary", "summarize", "main", "general", "all"
- "themes", "topics", "overall", "broadly", "big picture"
- "what are", "list all", "show me all"

**Specific keywords** (score: -1.0):
- "relationship between", "how does", "why does", "specific"
- "detail", "exactly", "precisely", "what is the connection"
- "explain how", "describe the", "between", "and"

**Score range**: -1.0 (very specific) to +1.0 (very broad)
- Multiple keywords are averaged
- No keywords = 0.0 (neutral/medium)

##### 2. Query Length Analysis (weight: 0.3)

Query length correlates with specificity:

| Word Count | Score | Interpretation |
|-----------|-------|----------------|
| 1-3 words | +0.5 | Short → broad (e.g., "AI overview") |
| 4-5 words | +0.2 | Medium-short |
| 6-7 words | 0.0 | Medium |
| 8-10 words | -0.3 | Medium-long → specific |
| 10+ words | -0.5 | Long → very specific |

**Rationale**: Short queries like "AI" are typically broad explorations, while long queries like "What is the detailed relationship between..." are specific.

##### 3. Entity Mention Analysis (weight: 0.2)

Counts indicators of entity references:
- Quoted phrases: `"entity name"`
- "and" between entities: `X and Y`
- "between" keyword: `between X and Y`

| Entity Indicators | Score | Interpretation |
|------------------|-------|----------------|
| 0 indicators | +0.3 | No entities → broad |
| 1 indicator | 0.0 | One entity → medium |
| 2 indicators | -0.4 | Two entities → specific |
| 3+ indicators | -0.7 | Multiple entities → very specific |

##### Scoring Formula

```
total_score = (keyword_score × 0.5) + (length_score × 0.3) + (entity_score × 0.2)
```

##### Complexity Mapping

| Score Range | Complexity | Hierarchical Level |
|------------|------------|-------------------|
| score ≥ 0.7 | **VeryBroad** | max_level (e.g., 3) |
| 0.4 ≤ score < 0.7 | **Broad** | max_level - 1 (e.g., 2) |
| -0.2 ≤ score < 0.4 | **Medium** | 1 |
| -0.5 ≤ score < -0.2 | **Specific** | 0 (finest) |
| score < -0.5 | **VerySpecific** | 0 (finest) |

##### Concrete Examples

**Example 1: Broad Query**
```
Query: "Give me an overview of AI"

Component Analysis:
├─ Keywords: "overview" found → +1.0
├─ Length: 6 words → 0.0
└─ Entities: 0 indicators → +0.3

Total Score: (1.0 × 0.5) + (0.0 × 0.3) + (0.3 × 0.2) = 0.56
→ Complexity: Broad
→ Selected Level: 2 (high-level communities)
```

**Example 2: Specific Query**
```
Query: "What is the relationship between Deep Learning and Neural Networks?"

Component Analysis:
├─ Keywords: "relationship between" → -1.0
├─ Length: 10 words → -0.3
└─ Entities: "between" + "and" = 2 indicators → -0.4

Total Score: (-1.0 × 0.5) + (-0.3 × 0.3) + (-0.4 × 0.2) = -0.67
→ Complexity: VerySpecific
→ Selected Level: 0 (finest communities)
```

**Example 3: Medium Query**
```
Query: "Transformers"

Component Analysis:
├─ Keywords: none → 0.0
├─ Length: 1 word → +0.5
└─ Entities: 0 indicators → +0.3

Total Score: (0.0 × 0.5) + (0.5 × 0.3) + (0.3 × 0.2) = 0.21
→ Complexity: Medium
→ Selected Level: 1 (balanced detail)
```

##### Why This Works

- **Optimizes Recall**: Broad queries at high levels → more coverage
- **Optimizes Precision**: Specific queries at low levels → more detail
- **Zero Configuration**: Works out-of-the-box with sensible defaults
- **Transparent**: Use `adaptive_retrieve_detailed()` to see analysis scores

```

## Testing

Run tests with:
```bash
cargo test --package graphrag-core --features leiden --lib graph::leiden
```

All 3 tests passing:
- `test_leiden_basic` - End-to-end algorithm
- `test_is_well_connected` - Connectivity check
- `test_config_defaults` - Configuration validation

## References

- Paper: "From Louvain to Leiden: guaranteeing well-connected communities"
  - Traag, Waltman & van Eck (2019)
  - Scientific Reports, volume 9, Article number: 5233
- Implementation Plan: `/home/dio/graphrag-rs/IMPLEMENTATION_PLAN_QUALITY_IMPROVEMENTS.md`

## Next Steps

To fully leverage hierarchical Leiden in your GraphRAG system:

1. **Enable hierarchical clustering** on your KnowledgeGraph:
   ```rust
   let communities = graph.detect_hierarchical_communities(config)?;
   ```

2. **Configure resolution** based on your graph density:
   - Dense entity graphs: `resolution = 0.5-0.8` (larger communities)
   - Sparse entity graphs: `resolution = 1.2-1.5` (smaller, focused communities)

3. **Generate automatic summaries**:
   ```toml
   [enhancements.leiden]
   generate_summaries = true
   max_summary_length = 5
   use_extractive_summary = true
   ```

4. **Use hierarchical levels** for adaptive retrieval:
   - Broad queries → Higher levels (coarse overview)
   - Specific queries → Level 0 (detailed, fine-grained)
   - Multi-hop reasoning → Traverse hierarchy

5. **Integrate with LLM pipeline** (optional):
   - Use `prepare_community_context()` for LLM input
   - Generate natural language summaries for each community
   - Store summaries for fast retrieval

6. **Benchmark** quality improvements:
   - Compare Louvain vs Leiden modularity scores
   - Measure retrieval accuracy with hierarchical structure
   - Track summary quality and relevance

## Key Advantages of Hierarchical GraphRAG

✅ **Well-connected communities**: Guaranteed by Leiden refinement phase
✅ **Entity metadata enrichment**: Full entity information (type, confidence, mentions)
✅ **Bottom-up summarization**: Hierarchical summaries from finest to coarsest level
✅ **Adaptive query routing**: Automatic level selection based on query complexity (NEW)
✅ **Zero-configuration intelligence**: Works out-of-the-box with sensible defaults
✅ **Microsoft GraphRAG architecture**: Proven approach from Microsoft Research
✅ **Type-safe**: Full Rust type safety with petgraph integration