grangers 0.6.1

A rust library for working with genomic ranges and annotations.
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
rust-version = "1.88"
name = "grangers"
version = "0.6.1"
authors = [
    "Dongze He <dhe17@umd.edu>",
    "Rob Patro <rob@cs.umd.edu>",
]
build = false
include = [
    "/src/lib.rs",
    "/src/grangers_info.rs",
    "/src/grangers_utils.rs",
    "/src/options.rs",
    "/src/reader.rs",
    "/src/reader/*.rs",
    "/tests/**",
    "/Cargo.toml",
    "/README.md",
    "/LICENSE",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A rust library for working with genomic ranges and annotations."
homepage = "https://github.com/COMBINE-lab/grangers"
readme = "README.md"
keywords = [
    "genomics",
    "GTF-GFF",
    "ranges",
    "genes",
    "genome-annotation",
]
categories = [
    "science",
    "data-structures",
]
license-file = "LICENSE"
repository = "https://github.com/COMBINE-lab/grangers"

[lib]
name = "grangers"
path = "src/lib.rs"
doctest = false

[[test]]
name = "test_iterator"
path = "tests/test_iterator.rs"

[[test]]
name = "test_parse_fixtures"
path = "tests/test_parse_fixtures.rs"

[dependencies.anyhow]
version = "1.0"

[dependencies.flate2]
version = "1.1.9"
features = ["zlib-rs"]
default-features = false

[dependencies.noodles]
version = "0.115.0"
features = [
    "gtf",
    "gff",
    "fasta",
    "core",
]

[dependencies.nutype]
version = "0.7.0"

[dependencies.polars]
version = "0.53"
features = [
    "lazy",
    "dataframe_arithmetic",
    "checked_arithmetic",
    "rows",
    "dtype-struct",
    "dtype-categorical",
    "list_eval",
    "concat_str",
    "strings",
    "is_in",
    "abs",
    "regex",
    "timezones",
    "polars-ops",
]

[dependencies.rust-lapper]
version = "1.3.0"

[dependencies.tracing]
version = "0.1.41"