grangers 0.2.1

A rust library for working with genomic ranges and annotations.
Documentation 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50

[dependencies.anyhow]
version = "1.0"

[dependencies.bedrs]
version = "0.0.26"

[dependencies.clap]
features = ["derive", "cargo", "deprecated", "wrap_help", "help", "usage", "error-context"]
version = "4.3.11"

[dependencies.flate2]
default-features = false
features = ["zlib"]
version = "1.0.26"

[dependencies.noodles]
features = ["gtf", "gff", "fasta", "core"]
version = "0.44.0"

[dependencies.peak_alloc]
version = "0.2.0"

[dependencies.polars]
features = ["lazy", "dataframe_arithmetic", "sort_multiple", "checked_arithmetic", "rows", "dtype-struct", "dtype-categorical", "list_eval", "concat_str", "strings"]
version = "0.30"

[dependencies.rust-lapper]
version = "1.1.0"

[dependencies.tracing]
version = "0.1.37"

[dependencies.tracing-subscriber]
default-features = true
features = ["env-filter"]
version = "0.3.17"

[package]
authors = ["Dongze He <dhe17@umd.edu>", "Rob Patro <rob@cs.umd.edu>"]
categories = ["science", "data-structures"]
description = "A rust library for working with genomic ranges and annotations."
edition = "2021"
homepage = "https://github.com/COMBINE-lab/grangers"
include = ["/src/lib.rs", "/src/grangers_info.rs", "/src/grangers_utils.rs", "/src/options.rs", "/src/reader.rs", "/src/reader/*.rs", "/Cargo.toml", "/Cargo.lock", "/README.md", "/LICENSE"]
keywords = ["genomics", "GTF-GFF", "ranges", "genes", "genome-annotation"]
license-file = "LICENSE"
name = "grangers"
readme = "README.md"
repository = "https://github.com/COMBINE-lab/grangers"
version = "0.2.1"