pub mod commands;
pub mod index_builder;
pub mod index_loader;
pub mod utils;
pub use index_builder::core::build_index;
pub use index_loader::{
core::{load_atn, load_sqs, safe_mmap_readonly},
gof::{GofMap, load_gof},
fts::{FtsMap, load_fts},
prt::{PrtMap, load_prt},
a2f::{A2fMap, load_a2f}
};
pub use utils::common::{
CommonArgs, append_suffix, check_index_files_exist, write_gff_output, write_gff_output_filtered,
};
pub use utils::tree_io::{save_multiple_trees, write_offsets_to_file};
pub use utils::tree::{Interval, IntervalTree};
pub use utils::tree_index::TreeIndexData;