gam-sae 0.3.148

Sparse-autoencoder latent-manifold terms for the gam penalized-likelihood engine
Documentation
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//! Factored-Htβ / low-rank-decoder REML tests, split out of `tests.rs` to keep
//! that file under the #780 10k-line gate. These exercise the factored border
//! dimension, the projected beta-penalty curvature, the native row-Htβ solve,
//! and the factored evidence / Occam term against the dense full-B baseline.

use super::*;
use approx::assert_abs_diff_eq;
use ndarray::array;

/// Build a low-rank decoder atom (`p` large, true column rank `r ≪ p`) and
/// verify the auto-activation installs a frame, the factored border holds
/// exactly `Σ M_k·r_k`, and reconstruction recovers `B_k` to machine
/// precision.
#[test]
pub(crate) fn factored_border_dim_invariant_and_reconstruction() {
    let m = 6usize;
    let p = 16usize;
    let r = 2usize;
    // B = C0 · Frameᵀ with a planted rank-`r` column span.
    let mut frame = Array2::<f64>::zeros((p, r));
    frame[[0, 0]] = 1.0;
    frame[[1, 1]] = 1.0;
    let mut c0 = Array2::<f64>::zeros((m, r));
    for mu in 0..m {
        c0[[mu, 0]] = 1.0 + mu as f64;
        c0[[mu, 1]] = 0.5 * mu as f64 - 1.0;
    }
    let decoder = fast_abt(&c0, &frame);
    let mut phi = Array2::<f64>::zeros((m, m));
    let mut jet = Array3::<f64>::zeros((m, m, 1));
    for mu in 0..m {
        phi[[mu, mu]] = 1.0;
        jet[[mu, mu, 0]] = 1.0;
    }
    let s_raw = gam_terms::basis::create_difference_penalty_matrix(m, 2, None).unwrap();
    let mut atom = SaeManifoldAtom::new(
        "lowrank",
        SaeAtomBasisKind::EuclideanPatch,
        1,
        phi,
        jet,
        decoder.clone(),
        s_raw,
    )
    .unwrap();
    let activated = atom.maybe_activate_decoder_frame().expect("activate");
    assert_eq!(
        activated,
        Some(r),
        "rank-{r} decoder should profile to r={r}"
    );
    assert_eq!(atom.border_frame_rank(), r);
    assert_eq!(atom.frame_manifold_dimension(), r * (p - r));

    // Reconstruction recovers B_k to machine precision.
    let coords = atom.factored_coordinates().unwrap().expect("coords");
    assert_eq!(coords.dim(), (m, r));
    let reconstructed = atom
        .reconstruct_decoder_coefficients(coords.view())
        .unwrap();
    for mu in 0..m {
        for j in 0..p {
            assert_abs_diff_eq!(reconstructed[[mu, j]], decoder[[mu, j]], epsilon = 1.0e-9);
        }
    }

    let term = SaeManifoldTerm::new(
        vec![atom],
        SaeAssignment::from_blocks_with_mode(
            Array2::<f64>::zeros((m, 1)),
            vec![Array2::<f64>::zeros((m, 1))],
            AssignmentMode::softmax(0.7),
        )
        .unwrap(),
    )
    .unwrap();
    // Border-size invariant: factored border == Σ M_k·r_k.
    grassmann_assert_border_dim_invariant(&term).expect("border invariant");
    assert_eq!(term.factored_border_dim(), m * r);
    assert_eq!(term.grassmann_evidence_dimension(), r * (p - r));
    // Round-trip flatten/scatter of the factored border preserves B_k.
    let mut term = term;
    let border = term.flatten_factored_border().unwrap();
    assert_eq!(border.len(), m * r);
    let saved = term.atoms[0].decoder_coefficients.clone();
    term.scatter_factored_border(border.view()).unwrap();
    for mu in 0..m {
        for j in 0..p {
            assert_abs_diff_eq!(
                term.atoms[0].decoder_coefficients[[mu, j]],
                saved[[mu, j]],
                epsilon = 1.0e-9
            );
        }
    }
}

#[test]
pub(crate) fn factored_beta_penalty_probing_matches_projected_dense_curvature() {
    let k_atoms = 2usize;
    let m = 4usize;
    let p = 24usize;
    let r = 2usize;
    let n_obs = 5usize;
    let mut atoms = Vec::with_capacity(k_atoms);
    let mut coord_blocks = Vec::with_capacity(k_atoms);
    for atom_idx in 0..k_atoms {
        let mut frame = Array2::<f64>::zeros((p, r));
        frame[[atom_idx * r, 0]] = 1.0;
        frame[[atom_idx * r + 1, 1]] = 1.0;
        let mut coords = Array2::<f64>::zeros((n_obs, 1));
        for row in 0..n_obs {
            coords[[row, 0]] = row as f64;
        }
        let mut phi = Array2::<f64>::zeros((n_obs, m));
        let mut jet = Array3::<f64>::zeros((n_obs, m, 1));
        for row in 0..n_obs {
            for basis_col in 0..m {
                let x = (row + 1) as f64 * (basis_col + 1) as f64;
                phi[[row, basis_col]] = 0.05 * x + if row == basis_col { 1.0 } else { 0.0 };
                jet[[row, basis_col, 0]] = 0.01 * x;
            }
        }
        let mut c = Array2::<f64>::zeros((m, r));
        for basis_col in 0..m {
            c[[basis_col, 0]] = 0.3 + 0.07 * (basis_col + atom_idx) as f64;
            c[[basis_col, 1]] = -0.2 + 0.05 * (basis_col * 2 + atom_idx) as f64;
        }
        let decoder = fast_abt(&c, &frame);
        let mut atom = SaeManifoldAtom::new(
            "factored_probe",
            SaeAtomBasisKind::EuclideanPatch,
            1,
            phi,
            jet,
            decoder,
            Array2::<f64>::eye(m),
        )
        .unwrap();
        atom.maybe_activate_decoder_frame()
            .expect("frame activation")
            .expect("rank-2 atom should activate a frame");
        atoms.push(atom);
        coord_blocks.push(coords);
    }
    let assignment = SaeAssignment::from_blocks_with_mode_and_manifolds(
        Array2::<f64>::from_elem((n_obs, k_atoms), 0.25),
        coord_blocks,
        vec![LatentManifold::Euclidean, LatentManifold::Euclidean],
        AssignmentMode::softmax(1.0),
    )
    .unwrap();
    let term = SaeManifoldTerm::new(atoms, assignment).unwrap();
    assert!(term.frames_active());
    assert_eq!(term.factored_border_dim(), k_atoms * m * r);

    let beta_len = term.beta_dim();
    let mut registry = AnalyticPenaltyRegistry::new();
    let nuclear = NuclearNormPenalty::new(
        PsiSlice {
            range: 0..beta_len,
            latent_dim: Some(beta_len / p),
        },
        0.7,
        p,
        1.0e-4,
        None,
        false,
    )
    .unwrap();
    registry.push(AnalyticPenaltyKind::NuclearNorm(Arc::new(nuclear)));
    let incoherence = DecoderIncoherencePenalty::new(
        PsiSlice {
            range: 0..beta_len,
            latent_dim: Some(beta_len / p),
        },
        vec![m, m],
        p,
        Array2::<f64>::from_elem((k_atoms, k_atoms), 0.5),
        0.6,
        false,
    )
    .unwrap();
    registry.push(AnalyticPenaltyKind::DecoderIncoherence(Arc::new(
        incoherence,
    )));

    let mut dense_sys = ArrowSchurSystem::new(0, 0, beta_len);
    let dense_assembly = term
        .add_sae_analytic_penalty_contributions(&mut dense_sys, &registry, 1.0, None, true, None)
        .unwrap();
    assert!(dense_assembly.dense_written);
    assert!(!dense_assembly.deferred_factored);

    let projection = FrameProjection::new(&term);
    let border_dim = term.factored_border_dim();
    let projected = term.project_dense_penalty_to_factored(dense_sys.hbb.view(), &projection);
    let direct = term.build_factored_beta_penalty_curvature(&registry, 1.0, &projection);
    for row in 0..border_dim {
        for col in 0..border_dim {
            assert_abs_diff_eq!(direct[[row, col]], projected[[row, col]], epsilon = 1.0e-10);
        }
    }

    let mut deferred_term = term.clone();
    let rho = SaeManifoldRho::new(
        0.0,
        -20.0,
        vec![Array1::<f64>::zeros(1), Array1::<f64>::zeros(1)],
    );
    let target = Array2::<f64>::zeros((n_obs, p));
    let sys = deferred_term
        .assemble_arrow_schur_scaled_with_beta_penalty_probe_threshold(
            target.view(),
            &rho,
            Some(&registry),
            1.0,
            1,
        )
        .unwrap();
    assert_eq!(sys.k, border_dim);
    assert!(sys.hbb.is_empty());
}

pub(crate) fn materialize_row_htbeta_for_test(
    sys: &ArrowSchurSystem,
    row_idx: usize,
) -> Array2<f64> {
    let di = sys.row_dims[row_idx];
    let k = sys.k;
    let row = &sys.rows[row_idx];
    let use_dense = sys.htbeta_dense_supplement || sys.htbeta_matvec.is_none();
    let mut out = if use_dense && row.htbeta.dim() == (di, k) {
        row.htbeta.clone()
    } else {
        Array2::<f64>::zeros((di, k))
    };
    if let Some(op) = sys.htbeta_matvec.as_ref() {
        let mut basis = Array1::<f64>::zeros(k);
        let mut col = Array1::<f64>::zeros(di);
        for beta_col in 0..k {
            basis.fill(0.0);
            basis[beta_col] = 1.0;
            col.fill(0.0);
            op(row_idx, basis.view(), &mut col);
            for row_col in 0..di {
                out[[row_col, beta_col]] += col[row_col];
            }
        }
    }
    out
}

pub(crate) fn project_row_htbeta_to_factored_for_test(
    term: &SaeManifoldTerm,
    htbeta_b: ArrayView2<'_, f64>,
) -> Array2<f64> {
    FrameProjection::new(term).project_rows(htbeta_b)
}

pub(crate) fn low_rank_factored_htbeta_term(
    k_atoms: usize,
    m: usize,
    p: usize,
    frame_rank: usize,
    latent_dim: usize,
    n_obs: usize,
) -> SaeManifoldTerm {
    let mut atoms = Vec::with_capacity(k_atoms);
    let mut coord_blocks = Vec::with_capacity(k_atoms);
    for atom_idx in 0..k_atoms {
        let coords = Array2::from_shape_fn((n_obs, latent_dim), |(row, axis)| {
            let phase = (row + 1) as f64 * (axis + 2) as f64 + 0.37 * (atom_idx + 1) as f64;
            0.2 * phase.sin() + 0.1 * (0.17 * phase).cos()
        });
        let mut phi = Array2::<f64>::zeros((n_obs, m));
        let mut jet = Array3::<f64>::zeros((n_obs, m, latent_dim));
        for row in 0..n_obs {
            for basis_col in 0..m {
                let base = (row + 1) as f64 * (basis_col + 1) as f64;
                phi[[row, basis_col]] = if basis_col == 0 { 1.0 } else { 0.0 }
                    + 0.01 * (base + 3.0 * atom_idx as f64).sin();
                for axis in 0..latent_dim {
                    jet[[row, basis_col, axis]] =
                        0.005 * ((base * (axis + 1) as f64) + atom_idx as f64).cos();
                }
            }
        }
        let mut frame = Array2::<f64>::zeros((p, frame_rank));
        for frame_col in 0..frame_rank {
            frame[[(atom_idx * frame_rank + frame_col) % p, frame_col]] = 1.0;
        }
        let coords_c = Array2::from_shape_fn((m, frame_rank), |(basis_col, frame_col)| {
            0.2 + 0.03 * (basis_col + 2 * frame_col + atom_idx) as f64
        });
        let decoder = coords_c.dot(&frame.t());
        let mut atom = SaeManifoldAtom::new(
            "factored_htbeta_shape",
            SaeAtomBasisKind::EuclideanPatch,
            latent_dim,
            phi,
            jet,
            decoder,
            Array2::<f64>::eye(m),
        )
        .unwrap();
        atom.maybe_activate_decoder_frame()
            .expect("frame activation")
            .expect("low-rank atom should activate a frame");
        atoms.push(atom);
        coord_blocks.push(coords);
    }
    let logits = Array2::<f64>::from_shape_fn((n_obs, k_atoms), |(row, atom)| {
        0.03 * ((row + 1) as f64 * (atom + 2) as f64).sin()
    });
    let manifolds =
        vec![LatentManifold::Product(vec![LatentManifold::Euclidean; latent_dim]); k_atoms];
    let assignment = SaeAssignment::from_blocks_with_mode_and_manifolds(
        logits,
        coord_blocks,
        manifolds,
        AssignmentMode::softmax(0.9),
    )
    .unwrap();
    SaeManifoldTerm::new(atoms, assignment).unwrap()
}

pub(crate) fn factored_htbeta_rho(k_atoms: usize, latent_dim: usize) -> SaeManifoldRho {
    SaeManifoldRho::new(0.0, -0.2, vec![Array1::<f64>::zeros(latent_dim); k_atoms])
}

#[test]
pub(crate) fn factored_row_htbeta_native_solve_matches_full_b_then_project() {
    let k_atoms = 2usize;
    let m = 4usize;
    let p = 24usize;
    let r = 2usize;
    let n_obs = 5usize;
    let mut atoms = Vec::with_capacity(k_atoms);
    let mut coord_blocks = Vec::with_capacity(k_atoms);
    for atom_idx in 0..k_atoms {
        let mut frame = Array2::<f64>::zeros((p, r));
        frame[[atom_idx * r, 0]] = 1.0;
        frame[[atom_idx * r + 1, 1]] = 1.0;
        let coords = Array2::from_shape_fn((n_obs, 1), |(row, _)| 0.1 * (row + 1) as f64);
        let mut phi = Array2::<f64>::zeros((n_obs, m));
        let mut jet = Array3::<f64>::zeros((n_obs, m, 1));
        for row in 0..n_obs {
            for basis_col in 0..m {
                let x = (row + 1) as f64 * (basis_col + 1) as f64;
                phi[[row, basis_col]] = 0.03 * x + if row % m == basis_col { 1.0 } else { 0.0 };
                jet[[row, basis_col, 0]] = 0.02 * x;
            }
        }
        let c = Array2::from_shape_fn((m, r), |(basis_col, frame_col)| {
            0.2 + 0.04 * (basis_col + 2 * frame_col + atom_idx) as f64
        });
        let decoder = fast_abt(&c, &frame);
        let mut atom = SaeManifoldAtom::new(
            "factored_row_native",
            SaeAtomBasisKind::EuclideanPatch,
            1,
            phi,
            jet,
            decoder,
            Array2::<f64>::eye(m),
        )
        .unwrap();
        atom.maybe_activate_decoder_frame()
            .expect("frame activation")
            .expect("rank-2 atom should activate a frame");
        atoms.push(atom);
        coord_blocks.push(coords);
    }
    let assignment = SaeAssignment::from_blocks_with_mode_and_manifolds(
        Array2::<f64>::from_shape_fn((n_obs, k_atoms), |(row, atom)| {
            0.15 * (row + 1) as f64 - 0.07 * atom as f64
        }),
        coord_blocks,
        vec![LatentManifold::Euclidean, LatentManifold::Euclidean],
        AssignmentMode::softmax(0.9),
    )
    .unwrap();
    let mut factored_term = SaeManifoldTerm::new(atoms, assignment).unwrap();
    assert!(factored_term.frames_active());
    let border_dim = factored_term.factored_border_dim();
    assert!(border_dim < factored_term.beta_dim());

    let mut full_term = factored_term.clone();
    for atom in &mut full_term.atoms {
        atom.deactivate_decoder_frame();
    }
    let rho = SaeManifoldRho::new(
        0.0,
        -0.2,
        vec![Array1::<f64>::zeros(1), Array1::<f64>::zeros(1)],
    );
    let target = Array2::<f64>::from_shape_fn((n_obs, p), |(row, col)| {
        0.01 * (row + 1) as f64 - 0.002 * (col + 1) as f64
    });

    let native_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    assert_eq!(native_sys.k, border_dim);
    assert!(native_sys.htbeta_matvec.is_none());
    assert!(native_sys.htbeta_transpose_matvec.is_none());
    for row in &native_sys.rows {
        assert_eq!(row.htbeta.ncols(), border_dim);
    }

    let full_sys = full_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    let mut projected_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    projected_sys.htbeta_matvec = None;
    projected_sys.htbeta_transpose_matvec = None;
    projected_sys.htbeta_dense_supplement = false;
    for row_idx in 0..n_obs {
        let htbeta_b = materialize_row_htbeta_for_test(&full_sys, row_idx);
        projected_sys.rows[row_idx].htbeta =
            project_row_htbeta_to_factored_for_test(&factored_term, htbeta_b.view());
    }
    projected_sys.refresh_row_hessian_fingerprint();

    let ridge_t = 5.0e-1;
    let (native_dt, native_db, _) = native_sys.solve(ridge_t, 1.0e-8).unwrap();
    let (projected_dt, projected_db, _) = projected_sys.solve(ridge_t, 1.0e-8).unwrap();

    assert_eq!(native_dt.len(), projected_dt.len());
    assert_eq!(native_db.len(), projected_db.len());
    for idx in 0..native_dt.len() {
        assert_abs_diff_eq!(native_dt[idx], projected_dt[idx], epsilon = 1.0e-10);
    }
    for idx in 0..native_db.len() {
        assert_abs_diff_eq!(native_db[idx], projected_db[idx], epsilon = 1.0e-10);
    }
}

/// #974: with a per-row `WhitenedStructured` metric installed, the frames-engaged
/// factored assembly must (a) STILL engage frames (border `Σ M_k·r_k`, not the
/// dense `M_k·p`) — proving the old `&& !whitens_likelihood` gate is gone — and
/// (b) its whitened Newton solve must equal the full-`B` whitened solve projected
/// into factored coordinates, so the metric-aware factored β-tier
/// (`WhitenedFactoredFrameOp` β-Gram + whitened `H_tβ` cross-block) matches the
/// dense-whitened fit where the frame contains the truth.
#[test]
pub(crate) fn whitened_frames_974_native_solve_matches_full_b_then_project() {
    use gam_problem::RowMetric;
    let k_atoms = 2usize;
    let m = 4usize;
    let p = 24usize;
    let r = 2usize;
    let n_obs = 5usize;
    let mut atoms = Vec::with_capacity(k_atoms);
    let mut coord_blocks = Vec::with_capacity(k_atoms);
    for atom_idx in 0..k_atoms {
        let mut frame = Array2::<f64>::zeros((p, r));
        frame[[atom_idx * r, 0]] = 1.0;
        frame[[atom_idx * r + 1, 1]] = 1.0;
        let coords = Array2::from_shape_fn((n_obs, 1), |(row, _)| 0.1 * (row + 1) as f64);
        let mut phi = Array2::<f64>::zeros((n_obs, m));
        let mut jet = Array3::<f64>::zeros((n_obs, m, 1));
        for row in 0..n_obs {
            for basis_col in 0..m {
                let x = (row + 1) as f64 * (basis_col + 1) as f64;
                phi[[row, basis_col]] = 0.03 * x + if row % m == basis_col { 1.0 } else { 0.0 };
                jet[[row, basis_col, 0]] = 0.02 * x;
            }
        }
        let c = Array2::from_shape_fn((m, r), |(basis_col, frame_col)| {
            0.2 + 0.04 * (basis_col + 2 * frame_col + atom_idx) as f64
        });
        let decoder = fast_abt(&c, &frame);
        let mut atom = SaeManifoldAtom::new(
            "whitened_frames_974",
            SaeAtomBasisKind::EuclideanPatch,
            1,
            phi,
            jet,
            decoder,
            Array2::<f64>::eye(m),
        )
        .unwrap();
        atom.maybe_activate_decoder_frame()
            .expect("frame activation")
            .expect("rank-2 atom should activate a frame");
        atoms.push(atom);
        coord_blocks.push(coords);
    }
    let assignment = SaeAssignment::from_blocks_with_mode_and_manifolds(
        Array2::<f64>::from_shape_fn((n_obs, k_atoms), |(row, atom)| {
            0.15 * (row + 1) as f64 - 0.07 * atom as f64
        }),
        coord_blocks,
        vec![LatentManifold::Euclidean, LatentManifold::Euclidean],
        AssignmentMode::softmax(0.9),
    )
    .unwrap();
    let mut factored_term = SaeManifoldTerm::new(atoms, assignment).unwrap();
    assert!(factored_term.frames_active());
    let border_dim = factored_term.factored_border_dim();
    assert!(border_dim < factored_term.beta_dim());

    // Per-row anisotropic WhitenedStructured metric M_n = U_n U_nᵀ (rank p),
    // genuinely non-scalar so the whitening materially changes the Hessian.
    let u = Array2::<f64>::from_shape_fn((n_obs, p * p), |(row, col)| {
        let i = col / p;
        let k = col % p;
        // A row-dependent near-diagonal factor with off-diagonal coupling.
        let diag = 1.0 + 0.5 * ((row + i) as f64).sin();
        let off = if i != k { 0.15 * (((row + 1) * (i + k + 1)) as f64).cos() } else { 0.0 };
        if i == k { diag } else { off }
    });
    let metric = RowMetric::whitened_structured(Arc::new(u), p, p).unwrap();
    assert!(metric.whitens_likelihood(), "fixture metric must whiten");
    factored_term.set_row_metric(metric).unwrap();

    // Full-B twin: same term + same metric, frames deactivated.
    let mut full_term = factored_term.clone();
    for atom in &mut full_term.atoms {
        atom.deactivate_decoder_frame();
    }
    assert!(!full_term.frames_active());

    let rho = SaeManifoldRho::new(
        0.0,
        -0.2,
        vec![Array1::<f64>::zeros(1), Array1::<f64>::zeros(1)],
    );
    let target = Array2::<f64>::from_shape_fn((n_obs, p), |(row, col)| {
        0.01 * (row + 1) as f64 - 0.002 * (col + 1) as f64
    });

    // (a) Frames STILL engage under whitening: factored border, not dense.
    let native_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    assert_eq!(
        native_sys.k, border_dim,
        "#974: frames must engage under whitening (factored border, not full-B)"
    );
    for row in &native_sys.rows {
        assert_eq!(row.htbeta.ncols(), border_dim);
    }

    // (b) Whitened native factored solve == full-B whitened solve, projected.
    let full_sys = full_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    assert_eq!(full_sys.k, full_term.beta_dim());
    let mut projected_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    projected_sys.htbeta_matvec = None;
    projected_sys.htbeta_transpose_matvec = None;
    projected_sys.htbeta_dense_supplement = false;
    for row_idx in 0..n_obs {
        let htbeta_b = materialize_row_htbeta_for_test(&full_sys, row_idx);
        projected_sys.rows[row_idx].htbeta =
            project_row_htbeta_to_factored_for_test(&factored_term, htbeta_b.view());
    }
    projected_sys.refresh_row_hessian_fingerprint();

    let ridge_t = 5.0e-1;
    let (native_dt, native_db, _) = native_sys.solve(ridge_t, 1.0e-8).unwrap();
    let (projected_dt, projected_db, _) = projected_sys.solve(ridge_t, 1.0e-8).unwrap();
    assert_eq!(native_dt.len(), projected_dt.len());
    assert_eq!(native_db.len(), projected_db.len());
    for idx in 0..native_dt.len() {
        assert_abs_diff_eq!(native_dt[idx], projected_dt[idx], epsilon = 1.0e-9);
    }
    for idx in 0..native_db.len() {
        assert_abs_diff_eq!(native_db[idx], projected_db[idx], epsilon = 1.0e-9);
    }
}

#[test]
pub(crate) fn factored_row_htbeta_d2_matches_dense_full_b_then_project() {
    let k_atoms = 3usize;
    let m = 5usize;
    let p = 32usize;
    let frame_rank = 2usize;
    let latent_dim = 2usize;
    let n_obs = 6usize;
    let mut factored_term =
        low_rank_factored_htbeta_term(k_atoms, m, p, frame_rank, latent_dim, n_obs);
    assert!(factored_term.frames_active());
    assert_eq!(
        factored_term.factored_border_dim(),
        k_atoms * m * frame_rank
    );
    assert!(factored_term.factored_border_dim() < factored_term.beta_dim());

    let mut full_term = factored_term.clone();
    for atom in &mut full_term.atoms {
        atom.deactivate_decoder_frame();
    }
    let rho = factored_htbeta_rho(k_atoms, latent_dim);
    let target = Array2::<f64>::from_shape_fn((n_obs, p), |(row, col)| {
        0.01 * (row + 1) as f64 - 0.002 * (col + 1) as f64
    });

    let native_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    let full_sys = full_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    let mut projected_sys = factored_term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();
    projected_sys.htbeta_matvec = None;
    projected_sys.htbeta_transpose_matvec = None;
    projected_sys.htbeta_dense_supplement = false;
    for row_idx in 0..n_obs {
        let htbeta_b = materialize_row_htbeta_for_test(&full_sys, row_idx);
        projected_sys.rows[row_idx].htbeta =
            project_row_htbeta_to_factored_for_test(&factored_term, htbeta_b.view());
    }
    projected_sys.refresh_row_hessian_fingerprint();

    let ridge_t = 5.0e-1;
    let (native_dt, native_db, _) = native_sys.solve(ridge_t, 1.0e-8).unwrap();
    let (projected_dt, projected_db, _) = projected_sys.solve(ridge_t, 1.0e-8).unwrap();
    assert_eq!(native_dt.len(), projected_dt.len());
    assert_eq!(native_db.len(), projected_db.len());
    for idx in 0..native_dt.len() {
        assert_abs_diff_eq!(native_dt[idx], projected_dt[idx], epsilon = 1.0e-10);
    }
    for idx in 0..native_db.len() {
        assert_abs_diff_eq!(native_db[idx], projected_db[idx], epsilon = 1.0e-10);
    }
}

#[test]
pub(crate) fn qwen_shape_d2_factored_htbeta_assembly_stays_below_8gib() {
    const K_ATOMS: usize = 8;
    const M: usize = 10;
    const P: usize = 2048;
    const FRAME_RANK: usize = 2;
    const LATENT_DIM: usize = 2;
    const N_OBS: usize = 2000;
    const EIGHT_GIB: usize = 8 * 1024 * 1024 * 1024;

    let mut term = low_rank_factored_htbeta_term(K_ATOMS, M, P, FRAME_RANK, LATENT_DIM, N_OBS);
    assert!(term.frames_active());
    assert_eq!(term.beta_dim(), K_ATOMS * M * P);
    assert_eq!(term.factored_border_dim(), K_ATOMS * M * FRAME_RANK);
    assert!(term.factored_border_dim() < term.beta_dim());

    let rho = factored_htbeta_rho(K_ATOMS, LATENT_DIM);
    let target = Array2::<f64>::from_shape_fn((N_OBS, P), |(row, col)| {
        1.0e-4 * ((row + 1) as f64 * (col + 3) as f64).sin()
    });
    let sys = term
        .assemble_arrow_schur(target.view(), &rho, None)
        .unwrap();

    assert_eq!(sys.k, term.factored_border_dim());
    assert!(sys.htbeta_matvec.is_none());
    assert!(sys.htbeta_transpose_matvec.is_none());
    let actual_row_dim = sys.row_dims[0];
    assert!(actual_row_dim > 0);
    assert!(sys.row_dims.iter().all(|&dim| dim == actual_row_dim));
    for row in &sys.rows {
        assert_eq!(row.htbeta.ncols(), term.factored_border_dim());
        assert_eq!(row.htbeta.nrows(), actual_row_dim);
    }

    let htbeta_bytes: usize = sys
        .rows
        .iter()
        .map(|row| row.htbeta.len() * std::mem::size_of::<f64>())
        .sum();
    let assembled_dense_bytes = htbeta_bytes
        + sys.hbb.len() * std::mem::size_of::<f64>()
        + sys.gb.len() * std::mem::size_of::<f64>();
    let old_full_b_htbeta_bytes = N_OBS
        .saturating_mul(actual_row_dim)
        .saturating_mul(term.beta_dim())
        .saturating_mul(std::mem::size_of::<f64>());

    assert!(
        old_full_b_htbeta_bytes > EIGHT_GIB,
        "test shape must reproduce the old p-wide H_tbeta memory wall"
    );
    assert!(
        assembled_dense_bytes < EIGHT_GIB,
        "qwen-shaped factored assembly stored {assembled_dense_bytes} bytes, \
             exceeding the 8 GiB gate"
    );
}

/// A full-rank small-`p` decoder must NOT activate a frame: the factored
/// border equals the full `M_k·p`, the Grassmann evidence dimension is `0`,
/// and the Occam normalizer is bit-for-bit the historical
/// `½·p·rank(S)·log λ` — the small-`p` evidence-equality contract.
#[test]
pub(crate) fn factored_evidence_matches_full_b_at_small_p() {
    let m = 5usize;
    let p = 2usize;
    // Full-rank decoder (rank 2 == p): no border saving, frame must stay off.
    let mut decoder = Array2::<f64>::zeros((m, p));
    for mu in 0..m {
        decoder[[mu, 0]] = 1.0 + mu as f64;
        decoder[[mu, 1]] = (mu as f64) - 2.0;
    }
    let mut phi = Array2::<f64>::zeros((m, m));
    let mut jet = Array3::<f64>::zeros((m, m, 1));
    for mu in 0..m {
        phi[[mu, mu]] = 1.0;
        jet[[mu, mu, 0]] = 1.0;
    }
    let s_raw = gam_terms::basis::create_difference_penalty_matrix(m, 2, None).unwrap();
    let mut atom = SaeManifoldAtom::new(
        "fullrank",
        SaeAtomBasisKind::EuclideanPatch,
        1,
        phi,
        jet,
        decoder,
        s_raw,
    )
    .unwrap();
    let activated = atom.maybe_activate_decoder_frame().expect("activate");
    assert_eq!(
        activated, None,
        "full-rank small-p must stay on full-B path"
    );
    assert!(atom.decoder_frame.is_none());
    assert_eq!(atom.border_frame_rank(), p);
    assert_eq!(atom.frame_manifold_dimension(), 0);

    let mut term = SaeManifoldTerm::new(
        vec![atom],
        SaeAssignment::from_blocks_with_mode(
            Array2::<f64>::zeros((m, 1)),
            vec![Array2::<f64>::zeros((m, 1))],
            AssignmentMode::softmax(0.7),
        )
        .unwrap(),
    )
    .unwrap();
    assert!(!term.frames_active());
    assert_eq!(term.factored_border_dim(), term.beta_dim());
    assert_eq!(term.grassmann_evidence_dimension(), 0);
    let activated_n = term.auto_activate_decoder_frames().expect("auto");
    assert_eq!(activated_n, 0, "small-p auto-activation must be a no-op");

    // Occam normalizer equals the historical ½·p·rank(S)·log λ exactly.
    let rho = SaeManifoldRho::new(0.0, 0.37, vec![array![0.0_f64]]);
    let occam = term.reml_occam_term(&rho).expect("occam");
    let rank_s = SaeManifoldTerm::symmetric_rank(&term.atoms[0].smooth_penalty).unwrap();
    let expected = 0.5 * (p as f64) * (rank_s as f64) * rho.log_lambda_smooth[0];
    assert_abs_diff_eq!(occam, expected, epsilon = 1.0e-12);
}