---
title: tools
---
Tools
========
## Galah process
[process](/tools/process) is used to run both the analyse and cluster commands in sequence.
## Galah cluster
[cluster](/tools/cluster) is the primary command used to dereplicate genomes or contigs into clusters based on average nucleotide identity (ANI), choosing a single representative genome from each cluster.
## Galah analyse
[analyse](/tools/analyse) is used to determine MIMAG quality scores for genomes based on their completeness, contamination and the presence of rRNA and tRNA genes.