Mar-02 23:54:10.031 [main] DEBUG nextflow.cli.Launcher - $> nextflow run main.nf --input_dir /home/alejandro/Downloads/kallisto_test/
Mar-02 23:54:10.078 [main] INFO nextflow.cli.CmdRun - N E X T F L O W ~ version 23.10.0
Mar-02 23:54:10.092 [main] DEBUG nextflow.plugin.PluginsFacade - Setting up plugin manager > mode=prod; embedded=false; plugins-dir=/home/alejandro/.nextflow/plugins; core-plugins: nf-amazon@2.1.4,nf-azure@1.3.2,nf-cloudcache@0.3.0,nf-codecommit@0.1.5,nf-console@1.0.6,nf-ga4gh@1.1.0,nf-google@1.8.3,nf-tower@1.6.3,nf-wave@1.0.0
Mar-02 23:54:10.099 [main] INFO o.pf4j.DefaultPluginStatusProvider - Enabled plugins: []
Mar-02 23:54:10.100 [main] INFO o.pf4j.DefaultPluginStatusProvider - Disabled plugins: []
Mar-02 23:54:10.102 [main] INFO org.pf4j.DefaultPluginManager - PF4J version 3.4.1 in 'deployment' mode
Mar-02 23:54:10.110 [main] INFO org.pf4j.AbstractPluginManager - No plugins
Mar-02 23:54:10.131 [main] DEBUG nextflow.scm.ProviderConfig - Using SCM config path: /home/alejandro/.nextflow/scm
Mar-02 23:54:10.137 [main] DEBUG nextflow.cli.Launcher - Operation aborted
nextflow.exception.AbortOperationException: Cannot find script file: main.nf
at nextflow.cli.CmdRun.getScriptFile(CmdRun.groovy:466)
at nextflow.cli.CmdRun.run(CmdRun.groovy:317)
at nextflow.cli.Launcher.run(Launcher.groovy:499)
at nextflow.cli.Launcher.main(Launcher.groovy:670)