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FlowGateDocument

flow_gate_xml

Struct FlowGateDocument 

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pub struct FlowGateDocument {
    pub transforms: HashMap<String, TransformKind>,
    pub ratio_transforms: HashMap<String, RatioTransformSpec>,
    pub spectrum_matrices: HashMap<String, SpectrumMatrixSpec>,
    pub gate_registry: GateRegistry,
    pub source_xml: Option<String>,
}

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§transforms: HashMap<String, TransformKind>§ratio_transforms: HashMap<String, RatioTransformSpec>§spectrum_matrices: HashMap<String, SpectrumMatrixSpec>§gate_registry: GateRegistry§source_xml: Option<String>

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impl FlowGateDocument

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pub fn parse_str(xml: &str) -> Result<Self, FlowGateError>

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pub fn classify( &self, matrix: &EventMatrix, ) -> Result<HashMap<GateId, BitVec>, FlowGateError>

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pub fn classify_view( &self, matrix: &EventMatrixView<'_>, ) -> Result<HashMap<GateId, BitVec>, FlowGateError>

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pub fn classify_with_fcs_compensation( &self, matrix: &EventMatrix, fcs_compensation: Option<&SpectrumMatrixSpec>, ) -> Result<HashMap<GateId, BitVec>, FlowGateError>

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pub fn classify_view_with_fcs_compensation( &self, matrix: &EventMatrixView<'_>, fcs_compensation: Option<&SpectrumMatrixSpec>, ) -> Result<HashMap<GateId, BitVec>, FlowGateError>

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pub fn prepare_owned_matrix_with_fcs_compensation( &self, matrix: &EventMatrix, fcs_compensation: Option<&SpectrumMatrixSpec>, ) -> Result<EventMatrix, FlowGateError>

Builds the exact preprocessed matrix (compensation + ratio dimensions) used by classify().

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pub fn to_xml(&self) -> Result<String, FlowGateError>

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pub fn gates(&self) -> impl Iterator<Item = (&GateId, &GateKind)>

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