[package]
edition = "2021"
name = "fg-stitch-lib"
version = "0.1.2"
authors = ["Fulcrum Genomics LLC"]
build = "build.rs"
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Stitch aligner implementation and supporting utilities."
readme = false
license = "MIT"
repository = "https://github.com/fulcrumgenomics/stitch"
[features]
low_mem = []
[lib]
name = "fg_stitch_lib"
path = "src/lib.rs"
[dependencies.anyhow]
version = "1.0.75"
[dependencies.bio]
version = "1.1.0"
[dependencies.bit-set]
version = "0.5.3"
[dependencies.cfg-if]
version = "1.0.0"
[dependencies.derive-getters]
version = "0.3.0"
[dependencies.derive_builder]
version = "0.12.0"
[dependencies.fgoxide]
version = "0.3.0"
[dependencies.flate2]
version = "1.0.26"
[dependencies.flume]
version = "0.10.14"
[dependencies.itertools]
version = "0.10.5"
[dependencies.lazy_static]
version = "1.4.0"
[dependencies.noodles]
version = "0.37.0"
features = [
"core",
"bgzf",
"sam",
"bam",
]
[dependencies.num_cpus]
version = "1.15.0"
[dependencies.seq_io]
version = "0.3.2"
[dependencies.serde]
version = "1.0.162"
[dev-dependencies.rstest]
version = "0.17.0"
[build-dependencies.built]
version = "0.6.0"
features = ["git2"]