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use crate::parameters::parameterset::MismatchParams;
pub static MISMATCH_HAIRPIN_EN37: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ -30, -50, -30, -50],
/* [AU][C] */ [ -10, -20, -10, -20],
/* [AU][G] */ [ -120, -50, -110, -50],
/* [AU][U] */ [ -10, -30, -10, -120],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ -50, -30, -50, -30],
/* [UA][C] */ [ -20, -10, -20, 0],
/* [UA][G] */ [ -150, -30, -150, -30],
/* [UA][U] */ [ -20, -10, -20, -90],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ -150, -150, -140, -150],
/* [CG][C] */ [ -100, -110, -100, -80],
/* [CG][G] */ [ -230, -150, -240, -150],
/* [CG][U] */ [ -100, -140, -100, -210],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ -110, -150, -130, -150],
/* [GC][C] */ [ -110, -70, -110, -50],
/* [GC][G] */ [ -250, -150, -220, -150],
/* [GC][U] */ [ -110, -100, -110, -160],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 20, -50, -30, -50],
/* [GU][C] */ [ -10, -20, -10, -20],
/* [GU][G] */ [ -100, -50, -110, -50],
/* [GU][U] */ [ -10, -30, -10, -100],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ -50, -30, -60, -30],
/* [UG][C] */ [ -20, -10, -20, 0],
/* [UG][G] */ [ -90, -30, -110, -30],
/* [UG][U] */ [ -20, -10, -20, -90],
],
];
pub static MISMATCH_HAIRPIN_ENTH: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ -20, 570, 20, 570],
/* [AU][C] */ [ 140, 970, 140, 340],
/* [AU][G] */ [ -520, 570, 20, 570],
/* [AU][U] */ [ 140, 830, 140, -380],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ -30, -260, -520, -260],
/* [UA][C] */ [ -60, -140, -60, 190],
/* [UA][G] */ [ -590, -260, -520, -260],
/* [UA][U] */ [ -60, 230, -60, -70],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ -910, -560, -560, -560],
/* [CG][C] */ [ -570, -340, -570, -270],
/* [CG][G] */ [-1400, 560, -920, -560],
/* [CG][U] */ [ -570, -530, -570, -1440],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ -520, -400, -560, -400],
/* [GC][C] */ [ -720, 50, -720, -420],
/* [GC][G] */ [-1290, -400, -620, -400],
/* [GC][U] */ [ -720, -30, -720, -1080],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 30, 570, 20, 570],
/* [GU][C] */ [ 140, 970, 140, 340],
/* [GU][G] */ [ -270, 570, 20, 570],
/* [GU][U] */ [ 140, 830, 140, -50],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ -110, -260, -520, -260],
/* [UG][C] */ [ -60, -140, -60, 190],
/* [UG][G] */ [ 100, -260, 220, -260],
/* [UG][U] */ [ -60, 230, -60, -70],
],
];
pub static MISMATCH_INTERIOR_EN37: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 70, 70, -10, 70],
/* [AU][C] */ [ 70, 70, 70, 70],
/* [AU][G] */ [ -30, 70, -30, 70],
/* [AU][U] */ [ 70, 70, 70, 10],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 70, 70, -10, 70],
/* [UA][C] */ [ 70, 70, 70, 70],
/* [UA][G] */ [ -30, 70, -30, 70],
/* [UA][U] */ [ 70, 70, 70, 10],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, -80, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ -100, 0, -100, 0],
/* [CG][U] */ [ 0, 0, 0, -60],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, -80, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [ -100, 0, -100, 0],
/* [GC][U] */ [ 0, 0, 0, -60],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 70, 70, -10, 70],
/* [GU][C] */ [ 70, 70, 70, 70],
/* [GU][G] */ [ -30, 70, -30, 70],
/* [GU][U] */ [ 70, 70, 70, 10],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 70, 70, -10, 70],
/* [UG][C] */ [ 70, 70, 70, 70],
/* [UG][G] */ [ -30, 70, -30, 70],
/* [UG][U] */ [ 70, 70, 70, 10],
],
];
pub static MISMATCH_INTERIOR_ENTH: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 500, 500, 170, 500],
/* [AU][C] */ [ 500, 500, 500, 500],
/* [AU][G] */ [ -260, 500, 790, 500],
/* [AU][U] */ [ 500, 500, 500, -80],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 500, 500, 170, 500],
/* [UA][C] */ [ 500, 500, 500, 500],
/* [UA][G] */ [ -260, 500, 790, 500],
/* [UA][U] */ [ 500, 500, 500, -80],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, -340, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ -760, 0, 280, 0],
/* [CG][U] */ [ 0, 0, 0, -580],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, -340, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [ -760, 0, 280, 0],
/* [GC][U] */ [ 0, 0, 0, -580],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 500, 500, 170, 500],
/* [GU][C] */ [ 500, 500, 500, 500],
/* [GU][G] */ [ -260, 500, 790, 500],
/* [GU][U] */ [ 500, 500, 500, -80],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 500, 500, 170, 500],
/* [UG][C] */ [ 500, 500, 500, 500],
/* [UG][G] */ [ -260, 500, 790, 500],
/* [UG][U] */ [ 500, 500, 500, -80],
],
];
pub static MISMATCH_INTERIOR_1N_EN37: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 70, 70, 70, 70],
/* [AU][C] */ [ 70, 70, 70, 70],
/* [AU][G] */ [ 70, 70, 70, 70],
/* [AU][U] */ [ 70, 70, 70, 70],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 70, 70, 70, 70],
/* [UA][C] */ [ 70, 70, 70, 70],
/* [UA][G] */ [ 70, 70, 70, 70],
/* [UA][U] */ [ 70, 70, 70, 70],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, 0, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ 0, 0, 0, 0],
/* [CG][U] */ [ 0, 0, 0, 0],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, 0, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [ 0, 0, 0, 0],
/* [GC][U] */ [ 0, 0, 0, 0],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 70, 70, 70, 70],
/* [GU][C] */ [ 70, 70, 70, 70],
/* [GU][G] */ [ 70, 70, 70, 70],
/* [GU][U] */ [ 70, 70, 70, 70],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 70, 70, 70, 70],
/* [UG][C] */ [ 70, 70, 70, 70],
/* [UG][G] */ [ 70, 70, 70, 70],
/* [UG][U] */ [ 70, 70, 70, 70],
],
];
pub static MISMATCH_INTERIOR_1N_ENTH: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 500, 500, 500, 500],
/* [AU][C] */ [ 500, 500, 500, 500],
/* [AU][G] */ [ 500, 500, 500, 500],
/* [AU][U] */ [ 500, 500, 500, 500],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 500, 500, 500, 500],
/* [UA][C] */ [ 500, 500, 500, 500],
/* [UA][G] */ [ 500, 500, 500, 500],
/* [UA][U] */ [ 500, 500, 500, 500],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, 0, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ 0, 0, 0, 0],
/* [CG][U] */ [ 0, 0, 0, 0],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, 0, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [ 0, 0, 0, 0],
/* [GC][U] */ [ 0, 0, 0, 0],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 500, 500, 500, 500],
/* [GU][C] */ [ 500, 500, 500, 500],
/* [GU][G] */ [ 500, 500, 500, 500],
/* [GU][U] */ [ 500, 500, 500, 500],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 500, 500, 500, 500],
/* [UG][C] */ [ 500, 500, 500, 500],
/* [UG][G] */ [ 500, 500, 500, 500],
/* [UG][U] */ [ 500, 500, 500, 500],
],
];
pub static MISMATCH_INTERIOR_23_EN37: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 70, 70, 70, 70],
/* [AU][C] */ [ 70, 70, 70, 70],
/* [AU][G] */ [ -40, 70, 0, 70],
/* [AU][U] */ [ 70, 70, 70, 40],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 70, 70, 20, 70],
/* [UA][C] */ [ 70, 70, 70, 70],
/* [UA][G] */ [ -40, 70, 0, 70],
/* [UA][U] */ [ 70, 70, 70, 40],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, -50, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ -110, 0, -70, 0],
/* [CG][U] */ [ 0, 0, 0, -30],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, 0, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [ -120, 0, -70, 0],
/* [GC][U] */ [ 0, 0, 0, -30],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 70, 70, 70, 70],
/* [GU][C] */ [ 70, 70, 70, 70],
/* [GU][G] */ [ -40, 70, 0, 70],
/* [GU][U] */ [ 70, 70, 70, 40],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 70, 70, 20, 70],
/* [UG][C] */ [ 70, 70, 70, 70],
/* [UG][G] */ [ -40, 70, 0, 70],
/* [UG][U] */ [ 70, 70, 70, 40],
],
];
pub static MISMATCH_INTERIOR_23_ENTH: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ 500, 500, 500, 500],
/* [AU][C] */ [ 500, 500, 500, 500],
/* [AU][G] */ [ -580, 500, -400, 500],
/* [AU][U] */ [ 500, 500, 500, -140],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ 500, 500, -60, 500],
/* [UA][C] */ [ 500, 500, 500, 500],
/* [UA][G] */ [ -360, 500, -400, 500],
/* [UA][U] */ [ 500, 500, 500, -140],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ 0, 0, -570, 0],
/* [CG][C] */ [ 0, 0, 0, 0],
/* [CG][G] */ [ -860, 0, -900, 0],
/* [CG][U] */ [ 0, 0, 0, -640],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ 0, 0, 0, 0],
/* [GC][C] */ [ 0, 0, 0, 0],
/* [GC][G] */ [-1090, 0, -900, 0],
/* [GC][U] */ [ 0, 0, 0, -640],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ 500, 500, 500, 500],
/* [GU][C] */ [ 500, 500, 500, 500],
/* [GU][G] */ [ -580, 500, -400, 500],
/* [GU][U] */ [ 500, 500, 500, -140],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ 500, 500, -60, 500],
/* [UG][C] */ [ 500, 500, 500, 500],
/* [UG][G] */ [ -360, 500, -400, 500],
/* [UG][U] */ [ 500, 500, 500, -140],
],
];
pub static MISMATCH_MULTI_EN37: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ -100, -70, -110, -70],
/* [AU][C] */ [ -80, -60, -80, -60],
/* [AU][G] */ [ -110, -70, -120, -70],
/* [AU][U] */ [ -80, -50, -80, -50],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ -80, -60, -80, -60],
/* [UA][C] */ [ -100, -70, -100, -80],
/* [UA][G] */ [ -80, -60, -80, -60],
/* [UA][U] */ [ -100, -70, -100, -80],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ -110, -110, -160, -110],
/* [CG][C] */ [ -150, -70, -150, -100],
/* [CG][G] */ [ -130, -110, -140, -110],
/* [CG][U] */ [ -150, -50, -150, -70],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ -150, -100, -140, -100],
/* [GC][C] */ [ -150, -110, -150, -140],
/* [GC][G] */ [ -140, -100, -160, -100],
/* [GC][U] */ [ -150, -80, -150, -120],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ -100, -70, -50, -70],
/* [GU][C] */ [ -80, -60, -80, -60],
/* [GU][G] */ [ -110, -70, -80, -70],
/* [GU][U] */ [ -80, -50, -80, -50],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ -30, -60, -60, -60],
/* [UG][C] */ [ -100, -70, -100, -80],
/* [UG][G] */ [ -80, -60, -80, -60],
/* [UG][U] */ [ -100, -70, -100, -60],
],
];
pub static MISMATCH_MULTI_ENTH: MismatchParams = [
[ /* [cl][5] [3]: A C G U */
/* [AU][A] */ [ -400, -430, -380, -430],
/* [AU][C] */ [ -630, -510, -630, -140],
/* [AU][G] */ [ -890, -430, -890, -430],
/* [AU][U] */ [ -630, -180, -630, 140],
],
[ /* [cl][5] [3]: A C G U */
/* [UA][A] */ [ -390, -230, -310, -230],
/* [UA][C] */ [ 200, 600, 200, 460],
/* [UA][G] */ [ -350, -230, -350, -230],
/* [UA][U] */ [ 200, -30, 200, -170],
],
[ /* [cl][5] [3]: A C G U */
/* [CG][A] */ [ -520, -720, -710, -720],
/* [CG][C] */ [ -400, 50, -400, -30],
/* [CG][G] */ [ -560, -720, -620, -720],
/* [CG][U] */ [ -400, -420, -400, -500],
],
[ /* [cl][5] [3]: A C G U */
/* [GC][A] */ [ -910, -570, -820, -570],
/* [GC][C] */ [ -560, -340, -560, -530],
/* [GC][G] */ [ -560, -570, -920, -570],
/* [GC][U] */ [ -560, -270, -560, -860],
],
[ /* [cl][5] [3]: A C G U */
/* [GU][A] */ [ -480, -430, 310, -430],
/* [GU][C] */ [ -630, -510, -630, -140],
/* [GU][G] */ [ -890, -430, -150, -430],
/* [GU][U] */ [ -630, -180, -630, 140],
],
[ /* [cl][5] [3]: A C G U */
/* [UG][A] */ [ -340, -230, -60, -230],
/* [UG][C] */ [ 200, 600, 200, 460],
/* [UG][G] */ [ -350, -230, -350, -230],
/* [UG][U] */ [ 200, -30, 200, 160],
],
];
pub static MISMATCH_EXTERIOR_EN37: MismatchParams = MISMATCH_MULTI_EN37;
pub static MISMATCH_EXTERIOR_ENTH: MismatchParams = MISMATCH_MULTI_ENTH;