ferray-random 0.3.1

Random number generation and distributions for ferray
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
// ferray-random: Gamma family distributions — gamma, beta, chisquare, f, student_t, standard_gamma
//
// Gamma sampling uses Marsaglia & Tsang's method (shape >= 1) with
// Ahrens-Dieter transformation for shape < 1.

use ferray_core::{Array, FerrayError, IxDyn};

use crate::bitgen::BitGenerator;
use crate::distributions::normal::standard_normal_single;
use crate::generator::{Generator, generate_vec, shape_size, vec_to_array_f64};
use crate::shape::IntoShape;

/// Generate a single standard gamma variate with shape parameter `alpha`.
///
/// Uses Marsaglia & Tsang's method for alpha >= 1, and
/// the Ahrens-Dieter boost for alpha < 1.
pub(crate) fn standard_gamma_single<B: BitGenerator>(bg: &mut B, alpha: f64) -> f64 {
    if alpha < 1.0 {
        // Ahrens-Dieter: if X ~ Gamma(alpha+1), then X * U^(1/alpha) ~ Gamma(alpha)
        if alpha <= 0.0 {
            return 0.0;
        }
        loop {
            let u = bg.next_f64();
            if u > f64::EPSILON {
                let x = standard_gamma_ge1(bg, alpha + 1.0);
                return x * u.powf(1.0 / alpha);
            }
        }
    } else {
        standard_gamma_ge1(bg, alpha)
    }
}

/// Marsaglia & Tsang's method for Gamma(alpha) with alpha >= 1.
fn standard_gamma_ge1<B: BitGenerator>(bg: &mut B, alpha: f64) -> f64 {
    let d = alpha - 1.0 / 3.0;
    let c = 1.0 / (9.0 * d).sqrt();

    loop {
        let x = standard_normal_single(bg);
        let v_base = 1.0 + c * x;
        if v_base <= 0.0 {
            continue;
        }
        let v = v_base * v_base * v_base;
        let u = bg.next_f64();
        // Squeeze test
        if u < (0.0331 * (x * x)).mul_add(-(x * x), 1.0) {
            return d * v;
        }
        if u.ln() < (0.5 * x).mul_add(x, d * (1.0 - v + v.ln())) {
            return d * v;
        }
    }
}

impl<B: BitGenerator> Generator<B> {
    /// Generate an array of standard gamma variates with shape parameter `alpha`.
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `alpha <= 0` or `size` is invalid.
    pub fn standard_gamma(
        &mut self,
        alpha: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if alpha <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "alpha must be positive, got {alpha}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| standard_gamma_single(bg, alpha));
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of gamma-distributed variates.
    ///
    /// The gamma distribution with shape `alpha` and scale `scale` has
    /// PDF: f(x) = x^(alpha-1) * exp(-x/scale) / (scale^alpha * Gamma(alpha)).
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `alpha <= 0`, `scale <= 0`, or `size` is invalid.
    pub fn gamma(
        &mut self,
        alpha: f64,
        scale: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if alpha <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "alpha must be positive, got {alpha}"
            )));
        }
        if scale <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "scale must be positive, got {scale}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| scale * standard_gamma_single(bg, alpha));
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of beta-distributed variates in (0, 1).
    ///
    /// Uses the relationship: if X ~ Gamma(a), Y ~ Gamma(b), then X/(X+Y) ~ Beta(a,b).
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `a <= 0`, `b <= 0`, or `size` is invalid.
    pub fn beta(
        &mut self,
        a: f64,
        b: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if a <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "a must be positive, got {a}"
            )));
        }
        if b <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "b must be positive, got {b}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| {
            let x = standard_gamma_single(bg, a);
            let y = standard_gamma_single(bg, b);
            if x + y == 0.0 {
                0.5 // Degenerate case
            } else {
                x / (x + y)
            }
        });
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of chi-squared distributed variates.
    ///
    /// Chi-squared(df) = Gamma(df/2, 2).
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `df <= 0` or `size` is invalid.
    pub fn chisquare(
        &mut self,
        df: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if df <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "df must be positive, got {df}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| 2.0 * standard_gamma_single(bg, df / 2.0));
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of F-distributed variates.
    ///
    /// F(d1, d2) = (Chi2(d1)/d1) / (Chi2(d2)/d2).
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if either df is non-positive or `size` is invalid.
    pub fn f(
        &mut self,
        dfnum: f64,
        dfden: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if dfnum <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "dfnum must be positive, got {dfnum}"
            )));
        }
        if dfden <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "dfden must be positive, got {dfden}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| {
            let x1 = standard_gamma_single(bg, dfnum / 2.0);
            let x2 = standard_gamma_single(bg, dfden / 2.0);
            if x2 == 0.0 {
                f64::INFINITY
            } else {
                (x1 / dfnum) / (x2 / dfden)
            }
        });
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of Student's t-distributed variates.
    ///
    /// t(df) = Normal(0,1) / sqrt(Chi2(df)/df).
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `df <= 0` or `size` is invalid.
    pub fn student_t(
        &mut self,
        df: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if df <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "df must be positive, got {df}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| {
            let z = standard_normal_single(bg);
            let chi2 = 2.0 * standard_gamma_single(bg, df / 2.0);
            z / (chi2 / df).sqrt()
        });
        vec_to_array_f64(data, &shape_vec)
    }

    /// Alias for [`student_t`](Self::student_t) using NumPy's `standard_t` spelling.
    ///
    /// # Errors
    /// Returns `FerrayError::InvalidValue` if `df <= 0` or `size` is invalid.
    pub fn standard_t(
        &mut self,
        df: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        self.student_t(df, size)
    }

    /// Generate an array of noncentral chi-squared variates.
    ///
    /// `noncentral_chisquare(df, nonc)` is the distribution of
    /// `sum((Z_i + mu_i)^2)` where `Z_i ~ N(0,1)` and the sum of the
    /// `mu_i^2` equals `nonc`. Implemented via the Poisson-mixed central
    /// chi-squared method: `N ~ Poisson(nonc/2)`, `X = 2 * Gamma((df + 2N)/2)`.
    ///
    /// Equivalent to `numpy.random.Generator.noncentral_chisquare`.
    ///
    /// # Errors
    /// - `FerrayError::InvalidValue` if `df <= 0`, `nonc < 0`, or `size` is invalid.
    pub fn noncentral_chisquare(
        &mut self,
        df: f64,
        nonc: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if df <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "df must be positive, got {df}"
            )));
        }
        if nonc < 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "nonc must be non-negative, got {nonc}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| {
            // Sample N ~ Poisson(nonc / 2) inline via Knuth (small lambda).
            // For nonc/2 in moderate range this is fast; for large nonc the
            // call still terminates quickly in practice.
            let lam = nonc / 2.0;
            let n_pois: u64 = if lam == 0.0 {
                0
            } else {
                let l = (-lam).exp();
                let mut k: u64 = 0;
                let mut p = 1.0;
                loop {
                    k += 1;
                    p *= bg.next_f64();
                    if p <= l {
                        break k - 1;
                    }
                }
            };
            let total_df = df + 2.0 * (n_pois as f64);
            2.0 * standard_gamma_single(bg, total_df / 2.0)
        });
        vec_to_array_f64(data, &shape_vec)
    }

    /// Generate an array of noncentral F-distributed variates.
    ///
    /// `noncentral_f(dfnum, dfden, nonc) = (Chi2_nc(dfnum, nonc)/dfnum) /
    /// (Chi2(dfden)/dfden)`.
    ///
    /// Equivalent to `numpy.random.Generator.noncentral_f`.
    ///
    /// # Errors
    /// - `FerrayError::InvalidValue` if any df is non-positive, `nonc < 0`,
    ///   or `size` is invalid.
    pub fn noncentral_f(
        &mut self,
        dfnum: f64,
        dfden: f64,
        nonc: f64,
        size: impl IntoShape,
    ) -> Result<Array<f64, IxDyn>, FerrayError> {
        if dfnum <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "dfnum must be positive, got {dfnum}"
            )));
        }
        if dfden <= 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "dfden must be positive, got {dfden}"
            )));
        }
        if nonc < 0.0 {
            return Err(FerrayError::invalid_value(format!(
                "nonc must be non-negative, got {nonc}"
            )));
        }
        let shape_vec = size.into_shape()?;
        let n = shape_size(&shape_vec);
        let data = generate_vec(self, n, |bg| {
            // Numerator: noncentral chi-squared sample (Poisson-mixed).
            let lam = nonc / 2.0;
            let n_pois: u64 = if lam == 0.0 {
                0
            } else {
                let l = (-lam).exp();
                let mut k: u64 = 0;
                let mut p = 1.0;
                loop {
                    k += 1;
                    p *= bg.next_f64();
                    if p <= l {
                        break k - 1;
                    }
                }
            };
            let total_dfnum = dfnum + 2.0 * (n_pois as f64);
            let chi2_num = 2.0 * standard_gamma_single(bg, total_dfnum / 2.0);
            let chi2_den = 2.0 * standard_gamma_single(bg, dfden / 2.0);
            if chi2_den == 0.0 {
                f64::INFINITY
            } else {
                (chi2_num / dfnum) / (chi2_den / dfden)
            }
        });
        vec_to_array_f64(data, &shape_vec)
    }
}

#[cfg(test)]
mod tests {
    use crate::default_rng_seeded;

    #[test]
    fn gamma_positive() {
        let mut rng = default_rng_seeded(42);
        let arr = rng.gamma(2.0, 1.0, 10_000).unwrap();
        let slice = arr.as_slice().unwrap();
        for &v in slice {
            assert!(v > 0.0);
        }
    }

    #[test]
    fn gamma_mean_variance() {
        let mut rng = default_rng_seeded(42);
        let n = 100_000;
        let shape = 3.0;
        let scale = 2.0;
        let arr = rng.gamma(shape, scale, n).unwrap();
        let slice = arr.as_slice().unwrap();
        let mean: f64 = slice.iter().sum::<f64>() / n as f64;
        let var: f64 = slice.iter().map(|&x| (x - mean).powi(2)).sum::<f64>() / n as f64;
        // Gamma(k, theta): mean = k*theta, var = k*theta^2
        let expected_mean = shape * scale;
        let expected_var = shape * scale * scale;
        let se = (expected_var / n as f64).sqrt();
        assert!(
            (mean - expected_mean).abs() < 3.0 * se,
            "gamma mean {mean} too far from {expected_mean}"
        );
        assert!(
            (var - expected_var).abs() / expected_var < 0.05,
            "gamma variance {var} too far from {expected_var}"
        );
    }

    #[test]
    fn gamma_small_shape() {
        let mut rng = default_rng_seeded(42);
        let arr = rng.gamma(0.5, 1.0, 10_000).unwrap();
        let slice = arr.as_slice().unwrap();
        for &v in slice {
            assert!(v > 0.0);
        }
    }

    #[test]
    fn beta_in_range() {
        let mut rng = default_rng_seeded(42);
        let arr = rng.beta(2.0, 5.0, 10_000).unwrap();
        let slice = arr.as_slice().unwrap();
        for &v in slice {
            assert!(v > 0.0 && v < 1.0, "beta value {v} out of (0,1)");
        }
    }

    #[test]
    fn beta_mean() {
        let mut rng = default_rng_seeded(42);
        let n = 100_000;
        let a = 2.0;
        let b = 5.0;
        let arr = rng.beta(a, b, n).unwrap();
        let slice = arr.as_slice().unwrap();
        let mean: f64 = slice.iter().sum::<f64>() / n as f64;
        // Beta(a,b): mean = a/(a+b)
        let expected_mean = a / (a + b);
        let expected_var = (a * b) / ((a + b).powi(2) * (a + b + 1.0));
        let se = (expected_var / n as f64).sqrt();
        assert!(
            (mean - expected_mean).abs() < 3.0 * se,
            "beta mean {mean} too far from {expected_mean}"
        );
    }

    #[test]
    fn chisquare_positive() {
        let mut rng = default_rng_seeded(42);
        let arr = rng.chisquare(5.0, 10_000).unwrap();
        let slice = arr.as_slice().unwrap();
        for &v in slice {
            assert!(v > 0.0);
        }
    }

    #[test]
    fn chisquare_mean() {
        let mut rng = default_rng_seeded(42);
        let n = 100_000;
        let df = 10.0;
        let arr = rng.chisquare(df, n).unwrap();
        let slice = arr.as_slice().unwrap();
        let mean: f64 = slice.iter().sum::<f64>() / n as f64;
        // Chi2(df): mean = df
        let expected_var = 2.0 * df;
        let se = (expected_var / n as f64).sqrt();
        assert!(
            (mean - df).abs() < 3.0 * se,
            "chisquare mean {mean} too far from {df}"
        );
    }

    #[test]
    fn f_positive() {
        let mut rng = default_rng_seeded(42);
        let arr = rng.f(5.0, 10.0, 10_000).unwrap();
        let slice = arr.as_slice().unwrap();
        for &v in slice {
            assert!(v > 0.0);
        }
    }

    #[test]
    fn student_t_symmetric() {
        let mut rng = default_rng_seeded(42);
        let n = 100_000;
        let df = 10.0;
        let arr = rng.student_t(df, n).unwrap();
        let slice = arr.as_slice().unwrap();
        let mean: f64 = slice.iter().sum::<f64>() / n as f64;
        // t(df) with df > 1: mean = 0
        assert!(mean.abs() < 0.05, "student_t mean {mean} too far from 0");
    }

    #[test]
    fn standard_gamma_mean() {
        let mut rng = default_rng_seeded(42);
        let n = 100_000;
        let shape = 5.0;
        let arr = rng.standard_gamma(shape, n).unwrap();
        let slice = arr.as_slice().unwrap();
        let mean: f64 = slice.iter().sum::<f64>() / n as f64;
        let se = (shape / n as f64).sqrt();
        assert!(
            (mean - shape).abs() < 3.0 * se,
            "standard_gamma mean {mean} too far from {shape}"
        );
    }

    #[test]
    fn gamma_bad_params() {
        let mut rng = default_rng_seeded(42);
        assert!(rng.gamma(0.0, 1.0, 100).is_err());
        assert!(rng.gamma(1.0, 0.0, 100).is_err());
        assert!(rng.gamma(-1.0, 1.0, 100).is_err());
    }

    #[test]
    fn standard_t_alias_matches_student_t() {
        // Same seed → same draws via either spelling.
        let mut rng_a = default_rng_seeded(7);
        let mut rng_b = default_rng_seeded(7);
        let a = rng_a.student_t(5.0, 100).unwrap();
        let b = rng_b.standard_t(5.0, 100).unwrap();
        assert_eq!(a.as_slice().unwrap(), b.as_slice().unwrap());
    }

    #[test]
    fn noncentral_chisquare_mean_approx() {
        // E[noncentral chi^2(df, lam)] = df + lam.
        let mut rng = default_rng_seeded(42);
        let n = 50_000;
        let arr = rng.noncentral_chisquare(5.0, 3.0, n).unwrap();
        let s = arr.as_slice().unwrap();
        let mean: f64 = s.iter().sum::<f64>() / n as f64;
        // 3 standard errors of slack — very generous for a Monte Carlo check.
        assert!((mean - 8.0).abs() < 0.5, "noncentral_chisquare mean {mean}");
    }

    #[test]
    fn noncentral_chisquare_zero_lambda_matches_chisquare() {
        let mut rng_a = default_rng_seeded(11);
        let mut rng_b = default_rng_seeded(11);
        let a = rng_a.noncentral_chisquare(4.0, 0.0, 1000).unwrap();
        let b = rng_b.chisquare(4.0, 1000).unwrap();
        // Both algorithms reduce to 2 * Gamma(df/2) under the same RNG sequence.
        for (x, y) in a.as_slice().unwrap().iter().zip(b.as_slice().unwrap()) {
            assert!((x - y).abs() < 1e-12);
        }
    }

    #[test]
    fn noncentral_chisquare_bad_params() {
        let mut rng = default_rng_seeded(0);
        assert!(rng.noncentral_chisquare(0.0, 1.0, 10).is_err());
        assert!(rng.noncentral_chisquare(1.0, -1.0, 10).is_err());
    }

    #[test]
    fn noncentral_f_positive() {
        let mut rng = default_rng_seeded(100);
        let arr = rng.noncentral_f(5.0, 7.0, 2.0, 1000).unwrap();
        for &v in arr.as_slice().unwrap() {
            assert!(v >= 0.0);
        }
    }

    #[test]
    fn noncentral_f_bad_params() {
        let mut rng = default_rng_seeded(0);
        assert!(rng.noncentral_f(0.0, 1.0, 1.0, 10).is_err());
        assert!(rng.noncentral_f(1.0, 0.0, 1.0, 10).is_err());
        assert!(rng.noncentral_f(1.0, 1.0, -1.0, 10).is_err());
    }
}