feagi-api 0.0.8

FEAGI REST API layer with HTTP and ZMQ transport adapters
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
// Copyright 2025 Neuraville Inc.
// Licensed under the Apache License, Version 2.0

//! Cortical Mapping API Endpoints - Exact port from Python `/v1/cortical_mapping/*`

// Removed - using crate::common::State instead
use crate::common::ApiState;
use crate::common::{ApiError, ApiResult, Json, Query, State};
use std::collections::HashMap;

/// POST /v1/cortical_mapping/afferents
#[utoipa::path(
    post,
    path = "/v1/cortical_mapping/afferents",
    tag = "cortical_mapping"
)]
pub async fn post_afferents(
    State(_state): State<ApiState>,
    Json(_req): Json<HashMap<String, String>>,
) -> ApiResult<Json<Vec<String>>> {
    Err(ApiError::internal("Not yet implemented"))
}

/// POST /v1/cortical_mapping/efferents
#[utoipa::path(
    post,
    path = "/v1/cortical_mapping/efferents",
    tag = "cortical_mapping"
)]
pub async fn post_efferents(
    State(_state): State<ApiState>,
    Json(_req): Json<HashMap<String, String>>,
) -> ApiResult<Json<Vec<String>>> {
    Err(ApiError::internal("Not yet implemented"))
}

/// POST /v1/cortical_mapping/mapping_properties
#[utoipa::path(
    post,
    path = "/v1/cortical_mapping/mapping_properties",
    tag = "cortical_mapping",
    responses(
        (status = 200, description = "Cortical mapping connections", body = Vec<serde_json::Value>),
        (status = 500, description = "Internal server error")
    )
)]
pub async fn post_mapping_properties(
    State(state): State<ApiState>,
    Json(req): Json<HashMap<String, serde_json::Value>>,
) -> ApiResult<Json<Vec<serde_json::Value>>> {
    use tracing::debug;

    let src_area = req
        .get("src_cortical_area")
        .and_then(|v| v.as_str())
        .ok_or_else(|| ApiError::invalid_input("Missing src_cortical_area"))?;

    let dst_area = req
        .get("dst_cortical_area")
        .and_then(|v| v.as_str())
        .ok_or_else(|| ApiError::invalid_input("Missing dst_cortical_area"))?;

    debug!(target: "feagi-api", "Getting mapping properties: {} -> {}", src_area, dst_area);

    let connectome_service = state.connectome_service.as_ref();

    // Get source cortical area
    let src_area_info = connectome_service
        .get_cortical_area(src_area)
        .await
        .map_err(|e| {
            ApiError::not_found("Cortical area", &format!("Source area {}: {}", src_area, e))
        })?;

    // Look for cortical_mapping_dst in properties
    let mapping_dst = src_area_info
        .properties
        .get("cortical_mapping_dst")
        .and_then(|v| v.as_object());

    if mapping_dst.is_none() {
        debug!(target: "feagi-api", "No cortical_mapping_dst found for {}", src_area);
        return Ok(Json(vec![]));
    }

    // Get connections for this destination
    let connections = mapping_dst
        .unwrap()
        .get(dst_area)
        .and_then(|v| v.as_array());

    if connections.is_none() {
        debug!(target: "feagi-api", "No connections found from {} to {}", src_area, dst_area);
        return Ok(Json(vec![]));
    }

    // Normalize connections to expected format
    let mut formatted = Vec::new();
    for conn in connections.unwrap() {
        if let Some(arr) = conn.as_array() {
            // Array format:
            // [morphology_id, morphology_scalar, psc_multiplier, plasticity_flag,
            //  plasticity_constant, ltp_multiplier, ltd_multiplier, plasticity_window,
            //  synaptic_delay_bursts]
            if arr.len() < 8 {
                return Err(ApiError::invalid_input(format!(
                    "Invalid dstmap rule array (expected 8 elements including plasticity_window), got {}: {:?}",
                    arr.len(),
                    arr
                )));
            }
            // Strict parsing (no implicit defaults).
            let morphology_id = arr[0]
                .as_str()
                .ok_or_else(|| ApiError::invalid_input("morphology_id must be a string"))?;
            let morphology_scalar = arr[1].clone();
            let psc_multiplier = arr[2].as_i64().ok_or_else(|| {
                ApiError::invalid_input("postSynapticCurrent_multiplier must be an integer")
            })?;
            let plasticity_flag = arr[3]
                .as_bool()
                .ok_or_else(|| ApiError::invalid_input("plasticity_flag must be a boolean"))?;
            let plasticity_constant = arr[4]
                .as_i64()
                .ok_or_else(|| ApiError::invalid_input("plasticity_constant must be an integer"))?;
            let ltp_multiplier = arr[5]
                .as_i64()
                .ok_or_else(|| ApiError::invalid_input("ltp_multiplier must be an integer"))?;
            let ltd_multiplier = arr[6]
                .as_i64()
                .ok_or_else(|| ApiError::invalid_input("ltd_multiplier must be an integer"))?;
            let plasticity_window = arr[7]
                .as_i64()
                .ok_or_else(|| ApiError::invalid_input("plasticity_window must be an integer"))?;

            let synaptic_delay_bursts: u64 = if arr.len() >= 9 {
                arr[8]
                    .as_u64()
                    .or_else(|| arr[8].as_i64().map(|i| i as u64))
                    .ok_or_else(|| {
                        ApiError::invalid_input(
                            "synaptic_delay_bursts must be a non-negative integer",
                        )
                    })?
            } else {
                1
            }
            .max(1);

            formatted.push(serde_json::json!({
                "morphology_id": morphology_id,
                "morphology_scalar": morphology_scalar,
                "postSynapticCurrent_multiplier": psc_multiplier,
                "plasticity_flag": plasticity_flag,
                "plasticity_constant": plasticity_constant,
                "ltp_multiplier": ltp_multiplier,
                "ltd_multiplier": ltd_multiplier,
                "plasticity_window": plasticity_window,
                "synaptic_delay_bursts": synaptic_delay_bursts,
            }));
        } else if let Some(obj) = conn.as_object() {
            // Dict format - strict schema (no implicit defaults)
            let morphology_id = obj
                .get("morphology_id")
                .and_then(|v| v.as_str())
                .ok_or_else(|| ApiError::invalid_input("morphology_id must be a string"))?;
            let morphology_scalar = obj
                .get("morphology_scalar")
                .cloned()
                .ok_or_else(|| ApiError::invalid_input("morphology_scalar missing"))?;
            let psc_multiplier = obj
                .get("postSynapticCurrent_multiplier")
                .and_then(|v| v.as_i64())
                .ok_or_else(|| {
                    ApiError::invalid_input("postSynapticCurrent_multiplier must be an integer")
                })?;
            let plasticity_flag = obj
                .get("plasticity_flag")
                .and_then(|v| v.as_bool())
                .ok_or_else(|| ApiError::invalid_input("plasticity_flag must be a boolean"))?;
            let plasticity_constant = obj
                .get("plasticity_constant")
                .and_then(|v| v.as_i64())
                .ok_or_else(|| ApiError::invalid_input("plasticity_constant must be an integer"))?;
            let ltp_multiplier = obj
                .get("ltp_multiplier")
                .and_then(|v| v.as_i64())
                .ok_or_else(|| ApiError::invalid_input("ltp_multiplier must be an integer"))?;
            let ltd_multiplier = obj
                .get("ltd_multiplier")
                .and_then(|v| v.as_i64())
                .ok_or_else(|| ApiError::invalid_input("ltd_multiplier must be an integer"))?;
            let plasticity_window = obj
                .get("plasticity_window")
                .and_then(|v| v.as_i64())
                .ok_or_else(|| ApiError::invalid_input("plasticity_window must be an integer"))?;

            let synaptic_delay_bursts: u64 = obj
                .get("synaptic_delay_bursts")
                .and_then(|v| v.as_u64().or_else(|| v.as_i64().map(|i| i as u64)))
                .unwrap_or(1)
                .max(1);

            formatted.push(serde_json::json!({
                "morphology_id": morphology_id,
                "morphology_scalar": morphology_scalar,
                "postSynapticCurrent_multiplier": psc_multiplier,
                "plasticity_flag": plasticity_flag,
                "plasticity_constant": plasticity_constant,
                "ltp_multiplier": ltp_multiplier,
                "ltd_multiplier": ltd_multiplier,
                "plasticity_window": plasticity_window,
                "synaptic_delay_bursts": synaptic_delay_bursts,
            }));
        }
    }

    debug!(target: "feagi-api", "Returning {} mapping connections from {} to {}", formatted.len(), src_area, dst_area);
    Ok(Json(formatted))
}

/// PUT /v1/cortical_mapping/mapping_properties
#[utoipa::path(
    put,
    path = "/v1/cortical_mapping/mapping_properties",
    tag = "cortical_mapping",
    responses(
        (status = 200, description = "Cortical mapping updated successfully", body = HashMap<String, serde_json::Value>),
        (status = 404, description = "Cortical area not found"),
        (status = 500, description = "Internal server error")
    )
)]
pub async fn put_mapping_properties(
    State(state): State<ApiState>,
    Json(req): Json<HashMap<String, serde_json::Value>>,
) -> ApiResult<Json<HashMap<String, serde_json::Value>>> {
    use tracing::{debug, info};

    let src_area = req
        .get("src_cortical_area")
        .and_then(|v| v.as_str())
        .ok_or_else(|| ApiError::invalid_input("Missing src_cortical_area"))?;

    let dst_area = req
        .get("dst_cortical_area")
        .and_then(|v| v.as_str())
        .ok_or_else(|| ApiError::invalid_input("Missing dst_cortical_area"))?;

    let mapping_string = req
        .get("mapping_string")
        .and_then(|v| v.as_array())
        .ok_or_else(|| ApiError::invalid_input("Missing mapping_string"))?;

    info!(
        target: "feagi-api",
        "PUT cortical mapping: {} -> {} with {} connections",
        src_area,
        dst_area,
        mapping_string.len()
    );
    debug!(target: "feagi-api", "Mapping data: {:?}", mapping_string);

    let connectome_service = state.connectome_service.as_ref();

    // Update the cortical mapping (this modifies ConnectomeManager and regenerates synapses)
    let synapse_count = connectome_service
        .update_cortical_mapping(
            src_area.to_string(),
            dst_area.to_string(),
            mapping_string.clone(),
        )
        .await
        .map_err(|e| match e {
            feagi_services::types::ServiceError::InvalidInput(msg) => ApiError::invalid_input(msg),
            feagi_services::types::ServiceError::Conflict(msg) => ApiError::conflict(msg),
            _ => ApiError::internal(format!("Failed to update cortical mapping: {}", e)),
        })?;

    info!(target: "feagi-api", "Cortical mapping updated successfully: {} synapses created", synapse_count);

    // Return success response matching Python format
    let mut response = HashMap::new();
    response.insert(
        "message".to_string(),
        serde_json::json!(format!(
            "Cortical mapping properties updated successfully from {} to {}",
            src_area, dst_area
        )),
    );
    response.insert(
        "synapse_count".to_string(),
        serde_json::json!(synapse_count),
    );
    response.insert("src_region".to_string(), serde_json::json!(null)); // TODO: Add region context
    response.insert("dst_region".to_string(), serde_json::json!(null)); // TODO: Add region context

    Ok(Json(response))
}

/// GET /v1/cortical_mapping/mapping
/// Get specific cortical mapping between two areas
#[utoipa::path(
    get,
    path = "/v1/cortical_mapping/mapping",
    tag = "cortical_mapping",
    params(
        ("src_cortical_area" = String, Query, description = "Source cortical area ID"),
        ("dst_cortical_area" = String, Query, description = "Destination cortical area ID")
    ),
    responses(
        (status = 200, description = "Mapping properties", body = HashMap<String, serde_json::Value>)
    )
)]
pub async fn get_mapping(
    State(state): State<ApiState>,
    Query(params): Query<HashMap<String, String>>,
) -> ApiResult<Json<HashMap<String, serde_json::Value>>> {
    let src_area = params
        .get("src_cortical_area")
        .ok_or_else(|| ApiError::invalid_input("src_cortical_area required"))?;
    let dst_area = params
        .get("dst_cortical_area")
        .ok_or_else(|| ApiError::invalid_input("dst_cortical_area required"))?;

    // Get mapping properties directly (avoid recursion)
    let connectome_service = state.connectome_service.as_ref();

    // Get source cortical area
    let src_area_info = connectome_service
        .get_cortical_area(src_area)
        .await
        .map_err(|e| {
            ApiError::not_found("Cortical area", &format!("Source area {}: {}", src_area, e))
        })?;

    // Look for cortical_mapping_dst in properties
    let mapping_dst = src_area_info
        .properties
        .get("cortical_mapping_dst")
        .and_then(|v| v.as_object());

    if mapping_dst.is_none() {
        return Ok(Json(HashMap::new()));
    }

    // Get connections for this destination
    let connections = mapping_dst
        .unwrap()
        .get(dst_area)
        .and_then(|v| v.as_array());

    let mut response = HashMap::new();
    response.insert(
        "connections".to_string(),
        serde_json::json!(connections.unwrap_or(&vec![])),
    );

    Ok(Json(response))
}

/// GET /v1/cortical_mapping/mapping_list
/// Get list of all cortical mappings
#[utoipa::path(
    get,
    path = "/v1/cortical_mapping/mapping_list",
    tag = "cortical_mapping",
    responses(
        (status = 200, description = "List of all mappings", body = Vec<Vec<String>>)
    )
)]
pub async fn get_mapping_list(State(state): State<ApiState>) -> ApiResult<Json<Vec<Vec<String>>>> {
    let connectome_service = state.connectome_service.as_ref();

    let areas = connectome_service
        .list_cortical_areas()
        .await
        .map_err(|e| ApiError::internal(format!("Failed to list areas: {}", e)))?;

    let mut mappings = Vec::new();

    // Scan all cortical_mapping_dst properties
    for area in &areas {
        if let Ok(area_detail) = connectome_service
            .get_cortical_area(&area.cortical_id)
            .await
        {
            if let Some(mapping_dst) = area_detail.properties.get("cortical_mapping_dst") {
                if let Some(dst_map) = mapping_dst.as_object() {
                    for dst_area_id in dst_map.keys() {
                        mappings.push(vec![area.cortical_id.clone(), dst_area_id.clone()]);
                    }
                }
            }
        }
    }

    Ok(Json(mappings))
}

/// DELETE /v1/cortical_mapping/mapping
/// Delete a cortical mapping
#[utoipa::path(
    delete,
    path = "/v1/cortical_mapping/mapping",
    tag = "cortical_mapping",
    responses(
        (status = 200, description = "Mapping deleted", body = HashMap<String, String>)
    )
)]
pub async fn delete_mapping(
    State(_state): State<ApiState>,
    Json(_request): Json<HashMap<String, String>>,
) -> ApiResult<Json<HashMap<String, String>>> {
    // TODO: Implement mapping deletion
    Ok(Json(HashMap::from([(
        "message".to_string(),
        "Mapping deletion not yet implemented".to_string(),
    )])))
}

/// POST /v1/cortical_mapping/batch_update
/// Batch update multiple cortical mappings
#[utoipa::path(
    post,
    path = "/v1/cortical_mapping/batch_update",
    tag = "cortical_mapping",
    responses(
        (status = 200, description = "Batch update completed", body = HashMap<String, serde_json::Value>)
    )
)]
pub async fn post_batch_update(
    State(_state): State<ApiState>,
    Json(_request): Json<Vec<HashMap<String, String>>>,
) -> ApiResult<Json<HashMap<String, serde_json::Value>>> {
    // TODO: Implement batch update
    let mut response = HashMap::new();
    response.insert(
        "message".to_string(),
        serde_json::json!("Batch update not yet implemented"),
    );
    response.insert("updated_count".to_string(), serde_json::json!(0));

    Ok(Json(response))
}

// EXACT Python paths:
/// POST /v1/cortical_mapping/mapping
#[utoipa::path(post, path = "/v1/cortical_mapping/mapping", tag = "cortical_mapping")]
pub async fn post_mapping(
    State(_state): State<ApiState>,
    Json(_req): Json<HashMap<String, serde_json::Value>>,
) -> ApiResult<Json<HashMap<String, String>>> {
    Ok(Json(HashMap::from([(
        "message".to_string(),
        "Not yet implemented".to_string(),
    )])))
}

/// PUT /v1/cortical_mapping/mapping
#[utoipa::path(put, path = "/v1/cortical_mapping/mapping", tag = "cortical_mapping")]
pub async fn put_mapping(
    State(_state): State<ApiState>,
    Json(_req): Json<HashMap<String, serde_json::Value>>,
) -> ApiResult<Json<HashMap<String, String>>> {
    Ok(Json(HashMap::from([(
        "message".to_string(),
        "Not yet implemented".to_string(),
    )])))
}