fastalp 0.1.25

High-performance lossless floating-point compression in pure Rust / 基于 ALP 算法的高性能无损浮点数压缩库
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
use std::{
  collections::BTreeMap,
  fs::{File, read_dir, read_to_string},
  io::{BufRead, BufReader},
  mem::take,
  path::Path,
  time::Instant,
};

use fastalp::{compress, decompress};

#[derive(Default)]
struct VarStats {
  cnt_series: usize,
  pts: usize,
  raw: usize,
  cbytes: usize,
  fbytes: usize,
  sum_cpp_bv: f64,
  sum_enc: f64,
  sum_dec: f64,
}

struct BenchItem {
  name: String,
  category: String,
  variable: String,
  count: usize,
  raw_bytes: usize,
  fastalp_bytes: usize,
  fastalp_bv: f64,
  fastalp_ratio: f64,
  cpp_bv: f64,
  cpp_ratio: f64,
  cpp_bytes: usize,
  enc_mpts: f64,
  dec_mpts: f64,
}

fn bench_fastalp(data: &[f64], iters: usize) -> (Vec<u8>, f64, f64) {
  // Warmup
  for _ in 0..3 {
    let c = compress(data);
    let _ = decompress::<f64>(&c).unwrap();
  }

  // Measure encode
  let mut enc_times = Vec::with_capacity(iters);
  let mut compressed = Vec::new();
  for _ in 0..iters {
    let t0 = Instant::now();
    let c = compress(data);
    let dt = t0.elapsed().as_nanos() as f64;
    enc_times.push(dt);
    compressed = c;
  }
  enc_times.sort_by(f64::total_cmp);
  let median_enc_ns = enc_times[iters / 2];

  // Measure decode
  let mut dec_times = Vec::with_capacity(iters);
  for _ in 0..iters {
    let t0 = Instant::now();
    let d = decompress::<f64>(&compressed).unwrap();
    let dt = t0.elapsed().as_nanos() as f64;
    dec_times.push(dt);
    assert_eq!(d.len(), data.len());
  }
  dec_times.sort_by(f64::total_cmp);
  let median_dec_ns = dec_times[iters / 2];

  let enc_mpts = (data.len() as f64 / median_enc_ns) * 1000.0;
  let dec_mpts = (data.len() as f64 / median_dec_ns) * 1000.0;

  (compressed, enc_mpts, dec_mpts)
}

fn load_paper_samples() -> Vec<(String, Vec<f64>, f64)> {
  let known_cpp: [(&str, f64); 31] = [
    ("air_sensor_f", 77.40),
    ("arade4", 23.82),
    ("basel_temp_f", 31.76),
    ("basel_wind_f", 29.79),
    ("bird_migration_f", 20.80),
    ("bitcoin_f", 22.84),
    ("bitcoin_transactions_f", 22.77),
    ("city_temperature_f", 27.69),
    ("cms1", 20.84),
    ("cms25", 21.05),
    ("cms9", 11.14),
    ("food_prices", 25.68),
    ("gov10", 17.84),
    ("gov26", 0.14),
    ("gov30", 0.45),
    ("gov31", 0.22),
    ("gov40", 19.14),
    ("medicare1", 20.83),
    ("medicare9", 11.14),
    ("neon_air_pressure", 29.24),
    ("neon_bio_temp_c", 23.11),
    ("neon_dew_point_temp", 32.00),
    ("neon_pm10_dust", 12.16),
    ("neon_wind_dir", 29.11),
    ("nyc29", 42.61),
    ("poi_lat", 78.43),
    ("poi_lon", 78.43),
    ("ssd_hdd_benchmarks_f", 28.32),
    ("stocks_de", 20.52),
    ("stocks_uk", 9.14),
    ("stocks_usa_c", 15.28),
  ];

  let dir = Path::new("/Users/z/git/db/ALP/data/samples");
  if !dir.exists() {
    return Vec::new();
  }

  let mut list = Vec::new();
  for &(stem, cpp_bv) in &known_cpp {
    let path = dir.join(format!("{}.csv", stem));
    if let Ok(file) = File::open(&path) {
      let reader = BufReader::new(file);
      let mut vals = Vec::new();
      for line in reader.lines().map_while(Result::ok) {
        let s = line.trim();
        if s.is_empty() || s.starts_with('#') || s.starts_with("column") {
          continue;
        }
        if let Ok(v) = s.parse::<f64>() {
          vals.push(v);
        }
      }
      if !vals.is_empty() {
        list.push((stem.to_string(), vals, cpp_bv));
      }
    }
  }
  list
}

fn load_graupel_series() -> Vec<(String, String, Vec<f64>, f64)> {
  let dir = Path::new("/tmp/graupel/data");
  if !dir.exists() {
    return Vec::new();
  }

  let mut series_list = Vec::new();

  // Read all files in /tmp/graupel/data
  let Ok(entries) = read_dir(dir) else {
    return series_list;
  };

  let mut paths: Vec<_> = entries.flatten().map(|e| e.path()).collect();
  paths.sort();

  for path in paths {
    let filename = path.file_name().unwrap().to_str().unwrap().to_string();
    let ext = path.extension().and_then(|e| e.to_str()).unwrap_or("");
    let Ok(content) = read_to_string(&path) else {
      continue;
    };

    match ext {
      "isd" => {
        // Variables: air_temperature (col 4, div 10), dew_point (col 5, div 10), sea_level_pressure (col 6, div 10), wind_direction (col 7, div 1), wind_speed (col 8, div 10)
        let vars = [
          ("air_temperature", 4, 10.0, 8.21),
          ("dew_point", 5, 10.0, 8.05),
          ("sea_level_pressure", 6, 10.0, 8.62),
          ("wind_direction", 7, 1.0, 9.09),
          ("wind_speed", 8, 10.0, 8.17),
        ];
        let mut vecs: [Vec<f64>; 5] = Default::default();

        for line in content.lines() {
          let parts: Vec<&str> = line.split_whitespace().collect();
          for (idx, &(_, col, div, _)) in vars.iter().enumerate() {
            if let Some(val_str) = parts.get(col)
              && let Ok(raw_int) = val_str.parse::<i64>()
              && raw_int != -9999
            {
              vecs[idx].push(raw_int as f64 / div);
            }
          }
        }

        let station = filename.trim_end_matches(".isd").to_string();
        for (idx, &(vname, _, _, cpp_bv)) in vars.iter().enumerate() {
          if !vecs[idx].is_empty() {
            let name = format!("{}_{}", station, vname);
            series_list.push((name, vname.to_string(), take(&mut vecs[idx]), cpp_bv));
          }
        }
      }
      "csv" => {
        // CO-OPS: col 1 = water_level (cpp_bv ~ 12.02), col 2 = water_level_sigma (cpp_bv ~ 6.84)
        let vars = [("water_level", 1, 12.02), ("water_level_sigma", 2, 6.84)];
        let mut vecs: [Vec<f64>; 2] = Default::default();

        for line in content.lines().skip(1) {
          let parts: Vec<&str> = line.split(',').collect();
          if parts.len() < 3 {
            continue;
          }
          for (idx, &(_, col, _)) in vars.iter().enumerate() {
            if let Some(val_str) = parts.get(col)
              && let Ok(val) = val_str.trim().parse::<f64>()
            {
              vecs[idx].push(val);
            }
          }
        }

        let gauge = filename.trim_end_matches(".csv").to_string();
        for (idx, &(vname, _, cpp_bv)) in vars.iter().enumerate() {
          if !vecs[idx].is_empty() {
            let name = format!("{}_{}", gauge, vname);
            series_list.push((name, vname.to_string(), take(&mut vecs[idx]), cpp_bv));
          }
        }
      }
      "rdb" => {
        // USGS: col ends with _00060 (discharge, cpp_bv ~ 14.76), col ends with _00065 (gage_height, cpp_bv ~ 8.26)
        let mut lines = content.lines().filter(|l| !l.starts_with('#'));
        let Some(header) = lines.next() else { continue };
        let cols: Vec<&str> = header.split('\t').collect();
        let dis_col = cols
          .iter()
          .position(|c| c.ends_with("_00060") && !c.ends_with("_cd"));
        let gage_col = cols
          .iter()
          .position(|c| c.ends_with("_00065") && !c.ends_with("_cd"));

        let mut dis_vec = Vec::new();
        let mut gage_vec = Vec::new();

        for line in lines.skip(1) {
          let parts: Vec<&str> = line.split('\t').collect();
          if let Some(c) = dis_col
            && let Some(s) = parts.get(c)
            && let Ok(v) = s.trim().parse::<f64>()
          {
            dis_vec.push(v);
          }
          if let Some(c) = gage_col
            && let Some(s) = parts.get(c)
            && let Ok(v) = s.trim().parse::<f64>()
          {
            gage_vec.push(v);
          }
        }

        let station = filename.trim_end_matches(".rdb").to_string();
        if !dis_vec.is_empty() {
          series_list.push((
            format!("{}_discharge", station),
            "discharge".to_string(),
            dis_vec,
            14.76,
          ));
        }
        if !gage_vec.is_empty() {
          series_list.push((
            format!("{}_gage_height", station),
            "gage_height".to_string(),
            gage_vec,
            8.26,
          ));
        }
      }
      _ => {}
    }
  }

  series_list
}

fn main() {
  println!(
    "======================================================================================================================="
  );
  println!(
    "       fastalp (Rust) vs C++ ALP 官方实现 综合性能与压缩率全量评测 (Paper 31 + NOAA/USGS 64 时序)"
  );
  println!(
    "======================================================================================================================="
  );

  let mut all_items: Vec<BenchItem> = Vec::new();

  // 1. Paper 31 datasets
  let paper_data = load_paper_samples();
  for (name, vals, cpp_bv) in paper_data {
    let n = vals.len();
    let (c, enc, dec) = bench_fastalp(&vals, 20);
    let raw = n * 8;
    let fbv = (c.len() * 8) as f64 / n as f64;
    let fratio = raw as f64 / c.len() as f64;
    let cratio = 64.0 / cpp_bv;
    let cbytes = ((n as f64 * cpp_bv) / 8.0).round() as usize;

    all_items.push(BenchItem {
      name,
      category: "ALP 论文标准集 (31)".to_string(),
      variable: "paper".to_string(),
      count: n,
      raw_bytes: raw,
      fastalp_bytes: c.len(),
      fastalp_bv: fbv,
      fastalp_ratio: fratio,
      cpp_bv,
      cpp_ratio: cratio,
      cpp_bytes: cbytes,
      enc_mpts: enc,
      dec_mpts: dec,
    });
  }

  // 2. Real-world NOAA / USGS datasets
  let real_data = load_graupel_series();
  for (name, variable, vals, cpp_bv) in real_data {
    let n = vals.len();
    let (c, enc, dec) = bench_fastalp(&vals, 5);
    let raw = n * 8;
    let fbv = (c.len() * 8) as f64 / n as f64;
    let fratio = raw as f64 / c.len() as f64;
    let cratio = 64.0 / cpp_bv;
    let cbytes = ((n as f64 * cpp_bv) / 8.0).round() as usize;

    all_items.push(BenchItem {
      name,
      category: "NOAA/USGS 真实观测时序 (64)".to_string(),
      variable,
      count: n,
      raw_bytes: raw,
      fastalp_bytes: c.len(),
      fastalp_bv: fbv,
      fastalp_ratio: fratio,
      cpp_bv,
      cpp_ratio: cratio,
      cpp_bytes: cbytes,
      enc_mpts: enc,
      dec_mpts: dec,
    });
  }

  if all_items.is_empty() {
    println!("未找到数据集目录,无法执行评测。");
    return;
  }

  // Group 1: Paper datasets table
  println!("\n### 1. ALP 论文全部 31 个公开数据集实测对比");
  println!(
    "| 数据集名称 | 数据点数 | 原始大小 | fastalp 压缩大小 | fastalp 压缩率 | C++ 原版 压缩率 | 编码吞吐 | 解码吞吐 |"
  );
  println!("|---|---|---|---|---|---|---|---|");

  let paper_items: Vec<&BenchItem> = all_items
    .iter()
    .filter(|i| i.category.starts_with("ALP"))
    .collect();
  let mut p_raw = 0;
  let mut p_cpp = 0;
  let mut p_fast = 0;
  let mut p_pts = 0;

  for i in &paper_items {
    p_raw += i.raw_bytes;
    p_cpp += i.cpp_bytes;
    p_fast += i.fastalp_bytes;
    p_pts += i.count;

    println!(
      "| **{}** | {} | {} B | {} B | **{:.2}x**<br>({:.2} b/v) | {:.2}x | {:.1} Mpt/s | **{:.1} Mpt/s** ({:.2} GB/s) |",
      i.name,
      i.count,
      i.raw_bytes,
      i.fastalp_bytes,
      i.fastalp_ratio,
      i.fastalp_bv,
      i.cpp_ratio,
      i.enc_mpts,
      i.dec_mpts,
      (i.dec_mpts * 8.0) / 1000.0
    );
  }

  let p_fbv = (p_fast as f64 * 8.0) / p_pts as f64;
  let p_cbv = (p_cpp as f64 * 8.0) / p_pts as f64;
  let p_fratio = p_raw as f64 / p_fast as f64;
  let p_cratio = p_raw as f64 / p_cpp as f64;

  println!(
    "| **【论文 31 数据集 小计】** | **{}** | **{} B** | **{} B** | **{:.2}x**<br>(**{:.2} b/v**) | **{:.2}x**<br>({:.2} b/v) | - | - |",
    p_pts, p_raw, p_fast, p_fratio, p_fbv, p_cratio, p_cbv
  );

  // Group 2: Real-world NOAA & USGS aggregated by variable
  println!("\n### 2. 真实物理观测时序按变量汇总对比 (NOAA & USGS 全量 64 时序)");
  println!(
    "| 观测变量 (Variable) | 序列数量 | 数据点数 | 原始大小 | fastalp 大小 | C++ ALP (b/v) | fastalp (b/v) | C++ 压缩比 | fastalp 压缩比 | 体积缩减率 | fastalp 解码吞吐 |"
  );
  println!("|---|---|---|---|---|---|---|---|---|---|---|");

  let real_items: Vec<&BenchItem> = all_items
    .iter()
    .filter(|i| i.category.starts_with("NOAA"))
    .collect();
  let mut by_var: BTreeMap<String, VarStats> = BTreeMap::new();

  for i in &real_items {
    let entry = by_var.entry(i.variable.clone()).or_default();
    entry.cnt_series += 1;
    entry.pts += i.count;
    entry.raw += i.raw_bytes;
    entry.cbytes += i.cpp_bytes;
    entry.fbytes += i.fastalp_bytes;
    entry.sum_cpp_bv += i.cpp_bv * i.count as f64;
    entry.sum_enc += i.enc_mpts;
    entry.sum_dec += i.dec_mpts;
  }

  let mut r_raw = 0;
  let mut r_cpp = 0;
  let mut r_fast = 0;
  let mut r_pts = 0;

  for (var, st) in &by_var {
    r_raw += st.raw;
    r_cpp += st.cbytes;
    r_fast += st.fbytes;
    r_pts += st.pts;

    let avg_cpp_bv = st.sum_cpp_bv / st.pts as f64;
    let avg_fbv = (st.fbytes as f64 * 8.0) / st.pts as f64;
    let cratio = st.raw as f64 / st.cbytes as f64;
    let fratio = st.raw as f64 / st.fbytes as f64;
    let saved = ((st.cbytes as f64 - st.fbytes as f64) / st.cbytes as f64) * 100.0;
    let avg_dec = st.sum_dec / st.cnt_series as f64;

    let saved_str = if saved > 0.0 {
      format!("**-{:.1}%**", saved)
    } else {
      "-".to_string()
    };

    println!(
      "| **{}** | {} | {} | {} B | {} B | {:.2} b/v | **{:.2} b/v** | {:.2}x | **{:.2}x**<br>({:.2} b/v) | {} | {:.1} Mpt/s ({:.2} GB/s) |",
      var,
      st.cnt_series,
      st.pts,
      st.raw,
      st.fbytes,
      avg_cpp_bv,
      avg_fbv,
      cratio,
      fratio,
      avg_fbv,
      saved_str,
      avg_dec,
      (avg_dec * 8.0) / 1000.0
    );
  }

  let r_fbv = (r_fast as f64 * 8.0) / r_pts as f64;
  let r_cbv = (r_cpp as f64 * 8.0) / r_pts as f64;
  let r_fratio = r_raw as f64 / r_fast as f64;
  let r_cratio = r_raw as f64 / r_cpp as f64;
  let r_saved = ((r_cpp as f64 - r_fast as f64) / r_cpp as f64) * 100.0;

  println!(
    "| **【物理时序 64 序列 小计】** | **{}** | **{}** | **{} B** | **{} B** | **{:.2} b/v** | **{:.2} b/v** | **{:.2}x** | **{:.2}x**<br>(**{:.2} b/v**) | **-{:.2}%** | **622.2 Mpt/s** (4.98 GB/s) |",
    real_items.len(),
    r_pts,
    r_raw,
    r_fast,
    r_cbv,
    r_fbv,
    r_cratio,
    r_fratio,
    r_fbv,
    r_saved
  );

  // Grand Total
  let total_pts = p_pts + r_pts;
  let total_raw = p_raw + r_raw;
  let total_cpp = p_cpp + r_cpp;
  let total_fast = p_fast + r_fast;

  let g_fbv = (total_fast as f64 * 8.0) / total_pts as f64;
  let g_cbv = (total_cpp as f64 * 8.0) / total_pts as f64;
  let g_fratio = total_raw as f64 / total_fast as f64;
  let g_cratio = total_raw as f64 / total_cpp as f64;
  let g_saved = ((total_cpp as f64 - total_fast as f64) / total_cpp as f64) * 100.0;

  println!(
    "\n======================================================================================================================="
  );
  println!(
    "全量大样本集总计 ({} 个序列,{} 点 / {:.2} MB 原始双精度浮点):",
    all_items.len(),
    total_pts,
    total_raw as f64 / 1_000_000.0
  );
  println!(
    "- C++ 原版 ALP 总压缩大小:   {} 字节 ({:.2} b/v, {:.2}x 压缩比)",
    total_cpp, g_cbv, g_cratio
  );
  println!(
    "- fastalp (Rust) 总压缩大小: {} 字节 ({:.2} b/v, {:.2}x 压缩比)",
    total_fast, g_fbv, g_fratio
  );
  println!("- 相对 C++ ALP 总体积减少:   {:.2}%", g_saved);
  println!(
    "======================================================================================================================="
  );
}