Struct exon::datasources::fastq::FASTQConfig

pub struct FASTQConfig {
    pub batch_size: usize,
    pub file_schema: SchemaRef,
    pub object_store: Arc<dyn ObjectStore>,
    pub projections: Option<Vec<usize>>,
}

Configuration for a FASTQ datasource.

Fields

batch_size: usize

The number of FASTQ records to read at a time.

file_schema: SchemaRef

The schema of the FASTQ file.

object_store: Arc<dyn ObjectStore>

The object store to use for reading FASTQ files.

projections: Option<Vec<usize>>

Any projections to apply to the data.

Implementations

impl FASTQConfig

pub fn new(object_store: Arc<dyn ObjectStore>) -> Self

Create a new FASTQ configuration.

pub fn with_batch_size(self, batch_size: usize) -> Self

Set the batch size.

pub fn with_projections(self, projections: Vec<usize>) -> Self

Set the projections.