dnacomb 1.0.0

Count the occurances of structured sequence reads and compare to an expected library
Documentation 
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{
    "id": "inframe_test",
    "forward_start_region": "primer_f",
    "forward_read_length": 24,
    "reverse_start_region": "primer_r",
    "reverse_read_length": 24,
    "regions": [
        {
            "id": "primer_f",
            "seq": "GGCC",
            "seq_type": "Fixed"
        },
        {
            "id": "region1",
            "seq_type": "Library",
            "min_length": 5,
            "max_length": 5,
            "max_distance": 0
        },
        {
            "id": "scaffold",
            "seq": "TTTAAGAGAATTT",
            "seq_type": "Fixed"
        },
        {
            "id": "region2",
            "seq_type": "Library",
            "min_length": 5,
            "max_length": 5,
            "max_distance": 0
        },
        {
            "id": "primer_r",
            "seq": "CCGG",
            "seq_type": "Fixed"
        }
    ]
}