dnacomb 1.0.0

Count the occurances of structured sequence reads and compare to an expected library
Documentation 
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@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@short_read
GGCCG
+
IGFDI
@short_read
GGCCG
+
IGFDI
@short_read
GGCCG
+
IGFDI
@short_read
GGCCG
+
IGFDI
@short_read
GGCCG
+
IGFDI
@long_read
GGCCGAAAGTTTAAGACGACGACGACGAAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@long_read
GGCCGAAAGTTTAAGACGACGACGACGAAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@long_read
GGCCGAAAGTTTAAGACGACGACGACGAAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@long_read
GGCCGAAAGTTTAAGACGACGACGACGAAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@low_quality
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
###############################
@low_quality
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
###############################
@low_quality
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
###############################
@bad_alignment
GGCCGAAAGTGTGCATAGCTTTGGGCC
+
IIIIIIIIIIIIIIIIIIIIIIIIIII
@bad_alignment
GGCCGAAAGTGTGCATAGCTTTGGGCC
+
IIIIIIIIIIIIIIIIIIIIIIIIIII
@empty_read

+
I
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
@full_read
GGCCGAAAGTTTAAGAGAATTTCTTTGCCGG
+
IIIIIIIIIIIIIIIIIIIIIIIIIIIIIII