data-beans 0.12.1

Sparse genomics data backends, QC, algorithms, and simulation
Documentation 
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pub mod column_subset; // stream a column/row selection into a new backend
pub mod convert; // data format conversion (h5/zarr → backend)
pub mod export; // backend → 10x mtx / h5ad, for scanpy and Seurat
#[cfg(feature = "figure")]
pub mod figure; // figures as SVG, written as PDF and PNG, shown as terminal images
pub mod hdf5_io; // HDF5/h5ad reading helpers
pub mod import; // 10x mtx / h5ad / 10x h5 → backend
#[cfg(feature = "tui")]
pub mod interactive; // full-screen terminal views (ratatui): screens, histograms, pickers
pub mod logging; // logger setup and progress bars (also data_beans::aux::logging)
pub mod qc; // QC primitives: nnz cuts, histograms, streaming stat collectors (CLI + faba)
pub mod qc_lib; // cell-axis QC (MAD outliers + near-empty floor); lib-only, senna/pinto
pub mod qc_rules; // cell QC as rules one moves: edges, what each removes, flags
pub mod sparse_backend; // storage backends (zarr, hdf5)
pub mod sparse_data_visitors; // visitor
pub mod sparse_io; // traits for sparse matrix
pub mod sparse_io_stack; // tall sparse io stack of vectors
pub mod sparse_io_vector; // wide sparse io vector
pub mod sparse_util; // sparse matrix triplets utils
pub mod utilities; // shared utility functions (name matching, IO helpers)
pub mod zarr_io; // read coordinate data from zarr files

#[cfg(feature = "aux")]
pub mod aux; // cell annotations, ontology, feature metadata (ex data_beans::aux)

#[cfg(feature = "alg")]
pub mod alg; // projection, collapse, HVG, etc. (ex data_beans::alg)

#[cfg(feature = "sim")]
pub mod sim; // simulation helpers (ex data-beans-sim)

// backward-compat re-exports
#[cfg(feature = "hdf5")]
pub use sparse_backend::hdf5 as sparse_matrix_hdf5;
pub use sparse_backend::zarr as sparse_matrix_zarr;