d4tools 0.3.9

The CLI utils for D4 file format
Documentation 
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name: d4-view - View a D4 file 
author: Hao Hou <haohou302@gmail.com>
args:
    - show-genome:
        short: g
        long: show-genome
        help: Show the genome file instead of the file content
    - input-file:
        required: true
        help: Path to the input file 
        index: 1
    - no-missing-data:
        required: false
        short: A
        long: no-missing-data
        help: Do not print print those region without data
    - first:
        short: f
        long: first
        help: "Show first data track from the given file"
    - filter:
        short: F
        long: filter
        value_name: 'TRACK-PATTERN'
        help: "A regex that matches all the track labels to be printed"
    - header:
        short: H
        long: header
        help: "Print the column header"
    - region-file:
        required: false
        help: A bed file that defines the region(s) to be viewed
        value_name: BED_FILE
        short: R
        long: region-file
    - regions:
        required: false
        help: Regions to be viewed
        value_name: chr:start-end
        index: 2
        multiple: true