cyto-workflow 0.3.1

Ultra high-throughput processing of 10x-flex single-cell sequencing data
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "cyto-workflow"
version = "0.3.1"
authors = ["Noam Teyssier <noam.teyssier@arcinstitute.org>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Ultra high-throughput processing of 10x-flex single-cell sequencing data"
readme = "README.md"
keywords = [
    "flex",
    "binseq",
    "single-cell",
    "probe",
    "sequencing",
]
categories = [
    "command-line-utilities",
    "science::bioinformatics",
]
license = "BSD-3-Clause"
repository = "https://github.com/arcinstitute/cyto"

[lib]
name = "cyto_workflow"
path = "src/lib.rs"

[dependencies.anyhow]
version = "1.0.102"

[dependencies.csv]
version = "1.4.0"

[dependencies.cyto-cli]
version = "0.7.2"

[dependencies.cyto-ibu-count]
version = "0.2.0"

[dependencies.cyto-ibu-reads]
version = "0.2.0"

[dependencies.cyto-ibu-sort]
version = "0.2.1"

[dependencies.cyto-ibu-umi-correct]
version = "0.2.1"

[dependencies.cyto-map]
version = "0.5.2"

[dependencies.glob]
version = "0.3.3"

[dependencies.log]
version = "0.4.29"

[dependencies.parking_lot]
version = "0.12"

[dependencies.rayon]
version = "1.11.0"

[dependencies.serde]
version = "1"
features = ["derive"]
default-features = false

[lints.clippy]
cast_possible_truncation = "allow"
cast_precision_loss = "allow"
len_without_is_empty = "allow"
missing_errors_doc = "allow"
missing_panics_doc = "allow"
module_inception = "allow"
module_name_repetitions = "allow"
must_use_candidate = "allow"
struct_field_names = "allow"

[lints.clippy.pedantic]
level = "warn"
priority = -1