cuttlefish-rs-cli 0.0.0

Command-line interface to Cuttlefish 3: parallel, external-memory construction of uncolored and colored compacted de Bruijn graphs.
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
rust-version = "1.85"
name = "cuttlefish-rs-cli"
version = "0.0.0"
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Command-line interface to Cuttlefish 3: parallel, external-memory construction of uncolored and colored compacted de Bruijn graphs."
homepage = "https://github.com/COMBINE-lab/cuttlefish"
readme = "README.md"
keywords = [
    "bioinformatics",
    "de-bruijn-graph",
    "genomics",
    "unitig",
    "k-mer",
]
categories = [
    "science",
    "command-line-utilities",
]
license = "BSD-3-Clause"
repository = "https://github.com/COMBINE-lab/cuttlefish"
resolver = "2"

[features]
default = ["jemalloc"]
jemalloc = ["dep:tikv-jemallocator"]
mimalloc = ["dep:mimalloc"]

[[bin]]
name = "cf3-compare-fasta"
path = "src/compare_fasta.rs"

[[bin]]
name = "cuttlefish3-rs"
path = "src/main.rs"

[dependencies.cuttlefish-rs]
version = "0.0.0"

[dependencies.mimalloc]
version = "0.1.48"
optional = true

[dependencies.tikv-jemallocator]
version = "0.5.4"
optional = true