channels:
- conda-forge
- bioconda
- defaults
dependencies:
- samtools >=1.9
- coreutils
- minimap2 >=2.24
- bwa >=0.7.17
# - bwa-mem2 # bwa-mem2 does not run on osx
- dashing >= 0.4.0
- fastani >= 1.3
- strobealign >= 0.11.0 # newest version at time of implementation