[package]
edition = "2015"
name = "coverm"
version = "0.8.0"
authors = ["Ben Woodcroft <benjwoodcroft@gmail.com>"]
build = false
exclude = [
"tests/*",
"demo/*",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
default-run = "coverm"
description = "Read coverage calculator for metagenomics"
homepage = "https://github.com/wwood/CoverM"
documentation = "https://github.com/wwood/CoverM"
readme = "README.md"
license = "GPL-3.0"
repository = "https://github.com/wwood/CoverM"
[lib]
name = "coverm"
path = "src/lib.rs"
[[bin]]
name = "coverm"
path = "src/bin/coverm.rs"
[dependencies.ansi_term]
version = "0.12"
[dependencies.bio]
version = "2.0.*"
[dependencies.bird_tool_utils]
version = ">=0.5.2, <0.6.0"
[dependencies.bird_tool_utils-man]
version = "0.4.0"
[dependencies.clap]
version = "4.*"
features = ["cargo"]
[dependencies.clap_complete]
version = "4.*"
[dependencies.csv]
version = "1.*"
[dependencies.env_logger]
version = "0.11.*"
[dependencies.galah]
version = ">=0.5.1, <0.6.0"
[dependencies.lazy_static]
version = "1.4.0"
[dependencies.log]
version = "0.4.*"
[dependencies.needletail]
version = "0.5.*"
[dependencies.nix]
version = "0.29.*"
features = ["fs"]
[dependencies.rand]
version = "0.8.*"
[dependencies.roff]
version = "0.2.*"
[dependencies.rust-htslib]
version = "0.46.*"
default-features = false
[dependencies.serde]
version = "1.0"
[dependencies.tempdir]
version = "0.3.*"
[dependencies.tempfile]
version = "3.*"
[dependencies.version-compare]
version = "0.2.0"
[dev-dependencies.assert_cli]
version = "0.6.*"
[dev-dependencies.cargo-husky]
version = "1"
features = [
"precommit-hook",
"run-cargo-fmt",
"run-cargo-clippy",
]
default-features = false
[profile.dist]
lto = true
inherits = "release"
[profile.release]
lto = true
strip = true