coredb-controller 0.0.1

CoreDB controller for Postgres
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
use crate::{telemetry, Error, Metrics, Result};
use chrono::{DateTime, Utc};
use futures::{
    future::{BoxFuture, FutureExt},
    stream::StreamExt,
};

use crate::{
    config::Config,
    cronjob::reconcile_cronjob,
    exec::{ExecCommand, ExecOutput},
    psql::{PsqlCommand, PsqlOutput},
    rbac::reconcile_rbac,
    service::reconcile_svc,
    statefulset::{reconcile_sts, stateful_set_from_cdb},
};
use kube::{
    api::{Api, ListParams, Patch, PatchParams, ResourceExt},
    client::Client,
    runtime::{
        controller::{Action, Controller},
        events::{Event, EventType, Recorder, Reporter},
        finalizer::{finalizer, Event as Finalizer},
    },
    Resource,
};

use crate::{
    apis::coredb_types::{CoreDB, CoreDBStatus},
    extensions::{reconcile_extensions, Extension},
    postgres_exporter::{create_postgres_exporter_role, reconcile_prom_configmap},
    secret::reconcile_secret,
};
use k8s_openapi::api::core::v1::{Namespace, Pod};
use kube::runtime::wait::Condition;
use serde::Serialize;
use serde_json::json;
use std::sync::Arc;
use tokio::{sync::RwLock, time::Duration};
use tracing::*;

pub static COREDB_FINALIZER: &str = "coredbs.coredb.io";
pub static COREDB_ANNOTATION: &str = "coredbs.coredb.io/watch";

// Context for our reconciler
#[derive(Clone)]
pub struct Context {
    /// Kubernetes client
    pub client: Client,
    /// Diagnostics read by the web server
    pub diagnostics: Arc<RwLock<Diagnostics>>,
    /// Prometheus metrics
    pub metrics: Metrics,
}

#[instrument(skip(ctx, cdb), fields(trace_id))]
async fn reconcile(cdb: Arc<CoreDB>, ctx: Arc<Context>) -> Result<Action> {
    let cfg = Config::default();
    let trace_id = telemetry::get_trace_id();
    Span::current().record("trace_id", &field::display(&trace_id));
    let _timer = ctx.metrics.count_and_measure();
    ctx.diagnostics.write().await.last_event = Utc::now();
    let ns = cdb.namespace().unwrap(); // cdb is namespace scoped
    let coredbs: Api<CoreDB> = Api::namespaced(ctx.client.clone(), &ns);
    // Get metadata for the CoreDB object
    let metadata = cdb.meta().clone();
    // Get annotations from the metadata
    let annotations = metadata.annotations.clone().unwrap_or_default();

    // Check the annotations to see if it exists and check it's value
    if let Some(value) = annotations.get(COREDB_ANNOTATION) {
        // If the value is false, then we should skip reconciling
        if value == "false" {
            info!(
                "Skipping reconciliation for CoreDB \"{}\" in {}",
                cdb.name_any(),
                ns
            );
            return Ok(Action::await_change());
        }
    }

    info!("Reconciling CoreDB \"{}\" in {}", cdb.name_any(), ns);
    finalizer(&coredbs, COREDB_FINALIZER, cdb, |event| async {
        match event {
            Finalizer::Apply(cdb) => match cdb.reconcile(ctx.clone(), &cfg).await {
                Ok(action) => Ok(action),
                Err(requeue_action) => Ok(requeue_action),
            },
            Finalizer::Cleanup(cdb) => cdb.cleanup(ctx.clone()).await,
        }
    })
    .await
    .map_err(|e| Error::FinalizerError(Box::new(e)))
}

fn error_policy(cdb: Arc<CoreDB>, error: &Error, ctx: Arc<Context>) -> Action {
    warn!("reconcile failed: {:?}", error);
    ctx.metrics.reconcile_failure(&cdb, error);
    Action::requeue(Duration::from_secs(5 * 60))
}

impl CoreDB {
    // Reconcile (for non-finalizer related changes)
    async fn reconcile(&self, ctx: Arc<Context>, cfg: &Config) -> Result<Action, Action> {
        let client = ctx.client.clone();
        let _recorder = ctx.diagnostics.read().await.recorder(client.clone(), self);
        let ns = self.namespace().unwrap();
        let name = self.name_any();
        let coredbs: Api<CoreDB> = Api::namespaced(client.clone(), &ns);

        // create/update configmap when postgres exporter enabled
        if self.spec.postgresExporterEnabled {
            reconcile_prom_configmap(self, client.clone(), &ns)
                .await
                .map_err(|e| {
                    error!("Error reconciling prometheus configmap: {:?}", e);
                    Action::requeue(Duration::from_secs(10))
                })?;
        }

        // reconcile service account, role, and role binding
        reconcile_rbac(self, ctx.clone()).await.map_err(|e| {
            error!("Error reconciling service account: {:?}", e);
            Action::requeue(Duration::from_secs(300))
        })?;

        // reconcile secret
        reconcile_secret(self, ctx.clone()).await.map_err(|e| {
            error!("Error reconciling secret: {:?}", e);
            Action::requeue(Duration::from_secs(10))
        })?;

        // reconcile cronjob for backups
        reconcile_cronjob(self, ctx.clone()).await.map_err(|e| {
            error!("Error reconciling cronjob: {:?}", e);
            Action::requeue(Duration::from_secs(10))
        })?;

        // reconcile statefulset
        reconcile_sts(self, ctx.clone()).await.map_err(|e| {
            error!("Error reconciling statefulset: {:?}", e);
            Action::requeue(Duration::from_secs(10))
        })?;

        // reconcile service
        reconcile_svc(self, ctx.clone()).await.map_err(|e| {
            error!("Error reconciling service: {:?}", e);
            Action::requeue(Duration::from_secs(10))
        })?;

        let new_status = match self.spec.stop {
            false => {
                let primary_pod = self.primary_pod(ctx.client.clone()).await;
                if primary_pod.is_err() {
                    debug!("Did not find primary pod");
                    return Ok(Action::requeue(Duration::from_secs(1)));
                }
                let primary_pod = primary_pod.unwrap();

                if !is_postgres_ready().matches_object(Some(&primary_pod)) {
                    debug!("Postgres is not ready");
                    return Ok(Action::requeue(Duration::from_secs(1)));
                }
                // creating exporter role is pre-requisite to the postgres pod becoming "ready"
                create_postgres_exporter_role(self, ctx.clone())
                    .await
                    .map_err(|e| {
                        error!(
                            "Error creating postgres_exporter on CoreDB {}, {}",
                            self.metadata.name.clone().unwrap(),
                            e
                        );
                        Action::requeue(Duration::from_secs(5))
                    })?;

                if !is_pod_ready().matches_object(Some(&primary_pod)) {
                    debug!("Did not find primary pod");
                    return Ok(Action::requeue(Duration::from_secs(1)));
                }

                let extensions: Vec<Extension> = reconcile_extensions(self, ctx.clone(), &coredbs, &name)
                    .await
                    .map_err(|e| {
                        error!("Error reconciling extensions: {:?}", e);
                        Action::requeue(Duration::from_secs(10))
                    })?;

                // Check cfg.enable_initial_backup to make sure we should run the initial backup
                // if it's true, run the backup
                if cfg.enable_initial_backup {
                    let backup_command = vec![
                        "/bin/sh".to_string(),
                        "-c".to_string(),
                        "/usr/bin/wal-g backup-push /var/lib/postgresql/data --full --verify".to_string(),
                    ];

                    let _backup_result = self
                        .exec(primary_pod.name_any(), client, &backup_command)
                        .await
                        .map_err(|e| {
                            error!("Error running backup: {:?}", e);
                            Action::requeue(Duration::from_secs(10))
                        })?;
                }

                CoreDBStatus {
                    running: true,
                    extensionsUpdating: false,
                    storage: self.spec.storage.clone(),
                    sharedirStorage: self.spec.sharedirStorage.clone(),
                    pkglibdirStorage: self.spec.pkglibdirStorage.clone(),
                    extensions: Some(extensions),
                }
            }
            true => CoreDBStatus {
                running: false,
                extensionsUpdating: false,
                storage: self.spec.storage.clone(),
                sharedirStorage: self.spec.sharedirStorage.clone(),
                pkglibdirStorage: self.spec.pkglibdirStorage.clone(),
                extensions: self.status.clone().and_then(|f| f.extensions),
            },
        };

        let patch_status = json!({
            "apiVersion": "coredb.io/v1alpha1",
            "kind": "CoreDB",
            "status": new_status
        });

        patch_cdb_status_force(&coredbs, &name, patch_status).await?;

        // If no events were received, check back every minute
        Ok(Action::requeue(Duration::from_secs(60)))
    }

    // Finalizer cleanup (the object was deleted, ensure nothing is orphaned)
    async fn cleanup(&self, ctx: Arc<Context>) -> Result<Action> {
        // If namespace is terminating, do not publish delete event. Attempting to publish an event
        // in a terminating namespace will leave us in a bad state in which the namespace will hang
        // in terminating state.
        let ns_api: Api<Namespace> = Api::all(ctx.client.clone());
        let ns_status = ns_api
            .get_status(self.metadata.namespace.as_ref().unwrap())
            .await
            .map_err(Error::KubeError);
        let phase = ns_status.unwrap().status.unwrap().phase;
        if phase == Some("Terminating".to_string()) {
            return Ok(Action::await_change());
        }
        let recorder = ctx.diagnostics.read().await.recorder(ctx.client.clone(), self);
        // CoreDB doesn't have dependencies in this example case, so we just publish an event
        recorder
            .publish(Event {
                type_: EventType::Normal,
                reason: "DeleteCoreDB".into(),
                note: Some(format!("Delete `{}`", self.name_any())),
                action: "Reconciling".into(),
                secondary: None,
            })
            .await
            .map_err(Error::KubeError)?;
        Ok(Action::await_change())
    }

    pub async fn primary_pod(&self, client: Client) -> Result<Pod, Error> {
        let sts = stateful_set_from_cdb(self);
        let sts_name = sts.metadata.name.unwrap();
        let sts_namespace = sts.metadata.namespace.unwrap();
        let label_selector = format!("statefulset={sts_name}");
        let list_params = ListParams::default().labels(&label_selector);
        let pods: Api<Pod> = Api::namespaced(client, &sts_namespace);
        let pods = pods.list(&list_params);
        // Return an error if the query fails
        let pod_list = pods.await.map_err(Error::KubeError)?;
        // Return an error if the list is empty
        if pod_list.items.is_empty() {
            return Err(Error::KubeError(kube::Error::Api(kube::error::ErrorResponse {
                status: "404".to_string(),
                message: "No pods found".to_string(),
                reason: "Not Found".to_string(),
                code: 404,
            })));
        }
        let primary = pod_list.items[0].clone();
        Ok(primary)
    }

    pub async fn psql(
        &self,
        command: String,
        database: String,
        client: Client,
    ) -> Result<PsqlOutput, kube::Error> {
        let pod_name = self
            .primary_pod(client.clone())
            .await
            .unwrap()
            .metadata
            .name
            .unwrap();

        PsqlCommand::new(
            pod_name,
            self.metadata.namespace.clone().unwrap(),
            command,
            database,
            client,
        )
        .execute()
        .await
    }

    pub async fn exec(
        &self,
        pod_name: String,
        client: Client,
        command: &[String],
    ) -> Result<ExecOutput, Error> {
        ExecCommand::new(pod_name, self.metadata.namespace.clone().unwrap(), client)
            .execute(command)
            .await
    }
}

pub fn is_pod_ready() -> impl Condition<Pod> + 'static {
    move |obj: Option<&Pod>| {
        if let Some(pod) = &obj {
            if let Some(status) = &pod.status {
                if let Some(conds) = &status.conditions {
                    if let Some(pcond) = conds.iter().find(|c| c.type_ == "ContainersReady") {
                        return pcond.status == "True";
                    }
                }
            }
        }
        false
    }
}

pub fn is_postgres_ready() -> impl Condition<Pod> + 'static {
    move |obj: Option<&Pod>| {
        if let Some(pod) = &obj {
            if let Some(status) = &pod.status {
                if let Some(container_statuses) = &status.container_statuses {
                    for container in container_statuses {
                        if container.name == "postgres" {
                            return container.ready;
                        }
                    }
                }
            }
        }
        false
    }
}

pub async fn patch_cdb_status_force(
    cdb: &Api<CoreDB>,
    name: &str,
    patch: serde_json::Value,
) -> Result<(), Action> {
    let ps = PatchParams::apply("cntrlr").force();
    let patch_status = Patch::Apply(patch);
    let _o = cdb.patch_status(name, &ps, &patch_status).await.map_err(|e| {
        error!("Error updating CoreDB status: {:?}", e);
        Action::requeue(Duration::from_secs(10))
    })?;
    Ok(())
}

pub async fn patch_cdb_status_merge(
    cdb: &Api<CoreDB>,
    name: &str,
    patch: serde_json::Value,
) -> Result<(), Action> {
    let pp = PatchParams::default();
    let patch_status = Patch::Merge(patch);
    let _o = cdb.patch_status(name, &pp, &patch_status).await.map_err(|e| {
        error!("Error updating CoreDB status: {:?}", e);
        Action::requeue(Duration::from_secs(10))
    })?;
    Ok(())
}

/// Diagnostics to be exposed by the web server
#[derive(Clone, Serialize)]
pub struct Diagnostics {
    #[serde(deserialize_with = "from_ts")]
    pub last_event: DateTime<Utc>,
    #[serde(skip)]
    pub reporter: Reporter,
}
impl Default for Diagnostics {
    fn default() -> Self {
        Self {
            last_event: Utc::now(),
            reporter: "coredb-controller".into(),
        }
    }
}
impl Diagnostics {
    fn recorder(&self, client: Client, cdb: &CoreDB) -> Recorder {
        Recorder::new(client, self.reporter.clone(), cdb.object_ref(&()))
    }
}

/// State shared between the controller and the web server
#[derive(Clone, Default)]
pub struct State {
    /// Diagnostics populated by the reconciler
    diagnostics: Arc<RwLock<Diagnostics>>,
    /// Metrics registry
    registry: prometheus::Registry,
}

/// State wrapper around the controller outputs for the web server
impl State {
    /// Metrics getter
    pub fn metrics(&self) -> Vec<prometheus::proto::MetricFamily> {
        self.registry.gather()
    }

    /// State getter
    pub async fn diagnostics(&self) -> Diagnostics {
        self.diagnostics.read().await.clone()
    }

    // Create a Controller Context that can update State
    pub fn create_context(&self, client: Client) -> Arc<Context> {
        Arc::new(Context {
            client,
            metrics: Metrics::default().register(&self.registry).unwrap(),
            diagnostics: self.diagnostics.clone(),
        })
    }
}

/// Initialize the controller and shared state (given the crd is installed)
pub async fn init(client: Client) -> (BoxFuture<'static, ()>, State) {
    let state = State::default();
    let cdb = Api::<CoreDB>::all(client.clone());
    if let Err(e) = cdb.list(&ListParams::default().limit(1)).await {
        error!("CRD is not queryable; {e:?}. Is the CRD installed?");
        info!("Installation: cargo run --bin crdgen | kubectl apply -f -");
        std::process::exit(1);
    }
    let controller = Controller::new(cdb, ListParams::default())
        .shutdown_on_signal()
        .run(reconcile, error_policy, state.create_context(client))
        .filter_map(|x| async move { Result::ok(x) })
        .for_each(|_| futures::future::ready(()))
        .boxed();
    (controller, state)
}

// Tests rely on fixtures.rs
#[cfg(test)]
mod test {
    use super::{reconcile, Context, CoreDB};
    use std::sync::Arc;

    #[tokio::test]
    async fn new_coredbs_without_finalizers_gets_a_finalizer() {
        let (testctx, fakeserver, _) = Context::test();
        let coredb = CoreDB::test();
        // verify that coredb gets a finalizer attached during reconcile
        fakeserver.handle_finalizer_creation(&coredb);
        let res = reconcile(Arc::new(coredb), testctx).await;
        assert!(res.is_ok(), "initial creation succeeds in adding finalizer");
    }

    #[tokio::test]
    async fn test_patches_coredb() {
        let (testctx, fakeserver, _) = Context::test();
        let coredb = CoreDB::test().finalized();
        fakeserver.handle_coredb_patch(&coredb);
        let res = reconcile(Arc::new(coredb), testctx).await;
        assert!(res.is_ok(), "finalized coredb succeeds in its reconciler");
    }
}