convert_genome 0.1.9

Convert DTC, VCF, or BCF genome files to VCF, BCF, or PLINK 1.9
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "convert_genome"
version = "0.1.9"
authors = ["Convert Genome Contributors"]
build = "build.rs"
exclude = [
    "data",
    "build",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Convert DTC, VCF, or BCF genome files to VCF, BCF, or PLINK 1.9"
documentation = "https://docs.rs/crate/convert_genome/latest"
readme = "README.md"
license = "MIT"
repository = "https://docs.rs/crate/convert_genome/latest"

[lib]
name = "convert_genome"
path = "src/lib.rs"

[[bin]]
name = "convert_genome"
path = "src/main.rs"

[[test]]
name = "compression_tests"
path = "tests/compression_tests.rs"

[[test]]
name = "data_files_test"
path = "tests/data_files_test.rs"

[[test]]
name = "integration_test"
path = "tests/integration_test.rs"

[[test]]
name = "plink_integration"
path = "tests/plink_integration.rs"

[[test]]
name = "proptest"
path = "tests/proptest.rs"

[[test]]
name = "remote_download"
path = "tests/remote_download.rs"

[[test]]
name = "strand_inference"
path = "tests/strand_inference.rs"

[[bench]]
name = "conversion"
path = "benches/conversion.rs"
harness = false

[dependencies.anyhow]
version = "1.0"

[dependencies.check_build]
version = "0.4.0"

[dependencies.clap]
version = "4.5"
features = ["derive"]

[dependencies.curl]
version = "0.4"

[dependencies.directories]
version = "6.0.0"

[dependencies.flate2]
version = "1.1"

[dependencies.infer_sex]
version = "0.1.1"

[dependencies.lru]
version = "0.16"

[dependencies.noodles]
version = "0.101"
features = [
    "bcf",
    "vcf",
    "fasta",
    "bgzf",
    "core",
]

[dependencies.parking_lot]
version = "0.12"

[dependencies.rayon]
version = "1.11"

[dependencies.rust-lapper]
version = "1.2.0"

[dependencies.serde]
version = "1.0"
features = ["derive"]

[dependencies.serde_json]
version = "1.0"

[dependencies.tempfile]
version = "3.23"

[dependencies.thiserror]
version = "2.0"

[dependencies.time]
version = "0.3"
features = [
    "formatting",
    "macros",
]

[dependencies.tracing]
version = "0.1"

[dependencies.tracing-subscriber]
version = "0.3"
features = [
    "fmt",
    "env-filter",
]

[dependencies.url]
version = "2.5"

[dependencies.zip]
version = "6.0"
features = ["deflate"]
default-features = false

[dev-dependencies.assert_cmd]
version = "2.0"

[dev-dependencies.assert_fs]
version = "1.1"

[dev-dependencies.criterion]
version = "0.7"

[dev-dependencies.pretty_assertions]
version = "1.4"

[dev-dependencies.proptest]
version = "1.9"

[dev-dependencies.serde_json]
version = "1.0"

[dev-dependencies.serial_test]
version = "3.2"

[dev-dependencies.walkdir]
version = "2.5"

[build-dependencies.grep]
version = "0.4"

[build-dependencies.walkdir]
version = "2.5"