codonrs 0.2.8

Calculate relative synonymous codon usage for coding DNA sequences in a fasta file
Documentation
version: 6
environments:
  default:
    channels:
    - url: https://conda.anaconda.org/conda-forge/
    packages:
      linux-64:
      - conda: https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
      - conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2
      - conda: https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.44-h9d8b0ac_5.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/gcc_impl_linux-64-15.2.0-hcacfade_7.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-4.18.0-he073ed8_8.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.44-h1aa0949_5.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/libgcc-15.2.0-h767d61c_7.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/libgcc-devel_linux-64-15.2.0-h73f6952_107.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/libgomp-15.2.0-h767d61c_7.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/libsanitizer-15.2.0-hb13aed2_7.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-15.2.0-h8f9b012_7.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.3.1-hb9d3cd8_2.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/rust-1.91.0-h53717f1_0.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-unknown-linux-gnu-1.91.0-h2c6d0dc_0.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.28-h4ee821c_8.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/tzdata-2025b-h78e105d_0.conda
      - conda: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.7-hb8e6e7a_2.conda
      osx-64:
      - conda: https://conda.anaconda.org/conda-forge/osx-64/rust-1.91.0-h34a2095_0.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-apple-darwin-1.91.0-h38e4360_0.conda
      osx-arm64:
      - conda: https://conda.anaconda.org/conda-forge/osx-arm64/rust-1.91.0-h4ff7c5d_0.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-aarch64-apple-darwin-1.91.0-hf6ec828_0.conda
      win-64:
      - conda: https://conda.anaconda.org/conda-forge/win-64/rust-1.91.0-hf8d6059_0.conda
      - conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-pc-windows-msvc-1.91.0-h17fc481_0.conda
packages:
- conda: https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
  sha256: fe51de6107f9edc7aa4f786a70f4a883943bc9d39b3bb7307c04c41410990726
  md5: d7c89558ba9fa0495403155b64376d81
  license: None
  size: 2562
  timestamp: 1578324546067
- conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2
  build_number: 16
  sha256: fbe2c5e56a653bebb982eda4876a9178aedfc2b545f25d0ce9c4c0b508253d22
  md5: 73aaf86a425cc6e73fcf236a5a46396d
  depends:
  - _libgcc_mutex 0.1 conda_forge
  - libgomp >=7.5.0
  constrains:
  - openmp_impl 9999
  license: BSD-3-Clause
  license_family: BSD
  size: 23621
  timestamp: 1650670423406
- conda: https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.44-h9d8b0ac_5.conda
  sha256: 62cd59d8e63a7d564e0c1be6864d1a57360c76ed5c813d8d178c88d79a989fc3
  md5: 071454f683b847f604f85b5284555dbf
  depends:
  - ld_impl_linux-64 2.44 h1aa0949_5
  - sysroot_linux-64
  - zstd >=1.5.7,<1.6.0a0
  license: GPL-3.0-only
  size: 3663196
  timestamp: 1762674679053
- conda: https://conda.anaconda.org/conda-forge/linux-64/gcc_impl_linux-64-15.2.0-hcacfade_7.conda
  sha256: 6a19411e3fe4e4f55509f4b0c374663b3f8903ed5ae1cc94be1b88846c50c269
  md5: 3d75679d5e2bd547cb52b913d73f69ef
  depends:
  - binutils_impl_linux-64 >=2.40
  - libgcc >=15.2.0
  - libgcc-devel_linux-64 15.2.0 h73f6952_107
  - libgomp >=15.2.0
  - libsanitizer 15.2.0 hb13aed2_7
  - libstdcxx >=15.2.0
  - sysroot_linux-64
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 77766660
  timestamp: 1759968214246
- conda: https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-4.18.0-he073ed8_8.conda
  sha256: 305c22a251db227679343fd73bfde121e555d466af86e537847f4c8b9436be0d
  md5: ff007ab0f0fdc53d245972bba8a6d40c
  constrains:
  - sysroot_linux-64 ==2.28
  license: LGPL-2.0-or-later AND LGPL-2.0-or-later WITH exceptions AND GPL-2.0-or-later
  license_family: GPL
  size: 1272697
  timestamp: 1752669126073
- conda: https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.44-h1aa0949_5.conda
  sha256: dab1fbf65abb05d3f2ee49dff90d60eeb2e02039fcb561343c7cea5dea523585
  md5: 511ed8935448c1875776b60ad3daf3a1
  depends:
  - __glibc >=2.17,<3.0.a0
  - zstd >=1.5.7,<1.6.0a0
  constrains:
  - binutils_impl_linux-64 2.44
  license: GPL-3.0-only
  size: 741516
  timestamp: 1762674665675
- conda: https://conda.anaconda.org/conda-forge/linux-64/libgcc-15.2.0-h767d61c_7.conda
  sha256: 08f9b87578ab981c7713e4e6a7d935e40766e10691732bba376d4964562bcb45
  md5: c0374badb3a5d4b1372db28d19462c53
  depends:
  - __glibc >=2.17,<3.0.a0
  - _openmp_mutex >=4.5
  constrains:
  - libgomp 15.2.0 h767d61c_7
  - libgcc-ng ==15.2.0=*_7
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 822552
  timestamp: 1759968052178
- conda: https://conda.anaconda.org/conda-forge/noarch/libgcc-devel_linux-64-15.2.0-h73f6952_107.conda
  sha256: 67323768cddb87e744d0e593f92445cd10005e04259acd3e948c7ba3bcb03aed
  md5: 85fce551e54a1e81b69f9ffb3ade6aee
  depends:
  - __unix
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 2728965
  timestamp: 1759967882886
- conda: https://conda.anaconda.org/conda-forge/linux-64/libgomp-15.2.0-h767d61c_7.conda
  sha256: e9fb1c258c8e66ee278397b5822692527c5f5786d372fe7a869b900853f3f5ca
  md5: f7b4d76975aac7e5d9e6ad13845f92fe
  depends:
  - __glibc >=2.17,<3.0.a0
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 447919
  timestamp: 1759967942498
- conda: https://conda.anaconda.org/conda-forge/linux-64/libsanitizer-15.2.0-hb13aed2_7.conda
  sha256: 4d15a66e136fba55bc0e83583de603f46e972f3486e2689628dfd9729a5c3d78
  md5: 4ea6053660330c1bbd4635b945f7626d
  depends:
  - __glibc >=2.17,<3.0.a0
  - libgcc >=15.2.0
  - libstdcxx >=15.2.0
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 5133768
  timestamp: 1759968130105
- conda: https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-15.2.0-h8f9b012_7.conda
  sha256: 1b981647d9775e1cdeb2fab0a4dd9cd75a6b0de2963f6c3953dbd712f78334b3
  md5: 5b767048b1b3ee9a954b06f4084f93dc
  depends:
  - __glibc >=2.17,<3.0.a0
  - libgcc 15.2.0 h767d61c_7
  constrains:
  - libstdcxx-ng ==15.2.0=*_7
  license: GPL-3.0-only WITH GCC-exception-3.1
  license_family: GPL
  size: 3898269
  timestamp: 1759968103436
- conda: https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.3.1-hb9d3cd8_2.conda
  sha256: d4bfe88d7cb447768e31650f06257995601f89076080e76df55e3112d4e47dc4
  md5: edb0dca6bc32e4f4789199455a1dbeb8
  depends:
  - __glibc >=2.17,<3.0.a0
  - libgcc >=13
  constrains:
  - zlib 1.3.1 *_2
  license: Zlib
  license_family: Other
  size: 60963
  timestamp: 1727963148474
- conda: https://conda.anaconda.org/conda-forge/linux-64/rust-1.91.0-h53717f1_0.conda
  sha256: e28695b4b100630fc41f6f5f4a345a652faea5921f3a264f085abf1ce57e18c0
  md5: 8cd76142f2bd3c5d9271282bbc795ba7
  depends:
  - __glibc >=2.17,<3.0.a0
  - gcc_impl_linux-64
  - libgcc >=14
  - libzlib >=1.3.1,<2.0a0
  - rust-std-x86_64-unknown-linux-gnu 1.91.0 h2c6d0dc_0
  - sysroot_linux-64 >=2.17
  license: MIT
  size: 233367042
  timestamp: 1762437215143
- conda: https://conda.anaconda.org/conda-forge/osx-64/rust-1.91.0-h34a2095_0.conda
  sha256: 59c62f709ea009a87d6a67ae6eb4e9af8c25eda34b7893011def51b7ca2f2a99
  md5: e0c86cd3fc3fd6236fd7e459c311381f
  depends:
  - rust-std-x86_64-apple-darwin 1.91.0 h38e4360_0
  license: MIT
  size: 202212397
  timestamp: 1762437087506
- conda: https://conda.anaconda.org/conda-forge/osx-arm64/rust-1.91.0-h4ff7c5d_0.conda
  sha256: e4409d457bf8e35977137a8ed10d97e1e3cf4b144c4ddbdd7ca5ca8c3f8b75a9
  md5: 412771062ed3a4768fabf2c722121f3f
  depends:
  - rust-std-aarch64-apple-darwin 1.91.0 hf6ec828_0
  license: MIT
  size: 240624653
  timestamp: 1762437162283
- conda: https://conda.anaconda.org/conda-forge/win-64/rust-1.91.0-hf8d6059_0.conda
  sha256: d846c0957ae37dabf239b95d745cf188b1e8459ba415c316d8c6a4b0996531ef
  md5: d18d1dff13b61fad8beed0554827f402
  depends:
  - rust-std-x86_64-pc-windows-msvc 1.91.0 h17fc481_0
  license: MIT
  size: 258312291
  timestamp: 1762439309332
- conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-aarch64-apple-darwin-1.91.0-hf6ec828_0.conda
  sha256: ef4924db46910c48c83ac3c18a8e6b01625a3c51205450911c7987c52eee4373
  md5: 9c77bee3cfdf2f715281ddce5359838f
  depends:
  - __unix
  constrains:
  - rust >=1.91.0,<1.91.1.0a0
  license: MIT
  size: 34788424
  timestamp: 1762436839115
- conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-apple-darwin-1.91.0-h38e4360_0.conda
  sha256: b87cb721a72a9b7c63d6d35a279bbd8ab5b02a2e7eeafcd5e3c16329dd46e5f7
  md5: c23a68b345a5e0cac5b61ead780d741b
  depends:
  - __unix
  constrains:
  - rust >=1.91.0,<1.91.1.0a0
  license: MIT
  size: 36128270
  timestamp: 1762436911534
- conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-pc-windows-msvc-1.91.0-h17fc481_0.conda
  sha256: 4180d156c435e58ba3e1ce5286c4d4adb88b57135a8a9e695002ea6f432e901f
  md5: 45f864b7610def3de5d1ce8395518129
  depends:
  - __win
  constrains:
  - rust >=1.91.0,<1.91.1.0a0
  license: MIT
  size: 28847114
  timestamp: 1762439070852
- conda: https://conda.anaconda.org/conda-forge/noarch/rust-std-x86_64-unknown-linux-gnu-1.91.0-h2c6d0dc_0.conda
  sha256: 8777d4b65e74d05a60e737ccc6c3127cacae3e08426fe6cb48a17fa88b028b9b
  md5: 2e30a8da5860a3ab9e794a984067ba45
  depends:
  - __unix
  constrains:
  - rust >=1.91.0,<1.91.1.0a0
  license: MIT
  size: 39154444
  timestamp: 1762437071320
- conda: https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.28-h4ee821c_8.conda
  sha256: 0053c17ffbd9f8af1a7f864995d70121c292e317804120be4667f37c92805426
  md5: 1bad93f0aa428d618875ef3a588a889e
  depends:
  - __glibc >=2.28
  - kernel-headers_linux-64 4.18.0 he073ed8_8
  - tzdata
  license: LGPL-2.0-or-later AND LGPL-2.0-or-later WITH exceptions AND GPL-2.0-or-later
  license_family: GPL
  size: 24210909
  timestamp: 1752669140965
- conda: https://conda.anaconda.org/conda-forge/noarch/tzdata-2025b-h78e105d_0.conda
  sha256: 5aaa366385d716557e365f0a4e9c3fca43ba196872abbbe3d56bb610d131e192
  md5: 4222072737ccff51314b5ece9c7d6f5a
  license: LicenseRef-Public-Domain
  size: 122968
  timestamp: 1742727099393
- conda: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.7-hb8e6e7a_2.conda
  sha256: a4166e3d8ff4e35932510aaff7aa90772f84b4d07e9f6f83c614cba7ceefe0eb
  md5: 6432cb5d4ac0046c3ac0a8a0f95842f9
  depends:
  - __glibc >=2.17,<3.0.a0
  - libgcc >=13
  - libstdcxx >=13
  - libzlib >=1.3.1,<2.0a0
  license: BSD-3-Clause
  license_family: BSD
  size: 567578
  timestamp: 1742433379869