bqtools 0.3.21

A command-line tool for interacting with BINSEQ file formats.
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[package]
name = "bqtools"
version = "0.3.21"
edition = "2021"
license = "MIT"
authors = ["Noam Teyssier <noam.teyssier@arcinstitute.org>"]
description = "A command-line tool for interacting with BINSEQ file formats."
repository = "https://github.com/arcinstitute/bqtools"
categories = ["command-line-utilities", "science::bioinformatics", "encoding"]
keywords = ["bioinformatics", "binseq", "vbinseq", "file-format", "sequencing"]

[dependencies]
anyhow = "1.0.94"
binseq = "0.6.4"
clap = { version = "4.5.23", features = ["derive"] }
itoa = "1.0.14"
gzp = "1.0.1"
libc = "0.2.171"
memchr = "2.7.4"
memmap2 = "0.9.5"
niffler = "3.0.0"
num_cpus = "1.16.0"
paraseq = "0.1.4"
parking_lot = "0.12.3"
rand = "0.9.0"
regex = "1.11.1"
zstd = { version = "0.13.2", features = ["zstdmt"] }

[dev-dependencies]
bon = "3.6.3"
itertools = "0.14.0"
nucgen = "0.2.0"
tempfile = "3.20.0"

[profile.release]
lto = true
codegen-units = 1

[lints.clippy]
pedantic = { level = "warn", priority = -1 }
cast_possible_truncation = "allow"
cast_precision_loss = "allow"