bixverse-sc-data 0.9.4

The bixverse single cell data layer: binary sparse format, streaming readers and h5ad, 10x h5 and MTX ingestion.
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "bixverse-sc-data"
version = "0.9.4"
authors = ["Gregor Lueg <gregorlueg@me.com>"]
build = "build.rs"
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "The bixverse single cell data layer: binary sparse format, streaming readers and h5ad, 10x h5 and MTX ingestion."
readme = "README.md"
keywords = [
    "bioinformatics",
    "single-cell",
    "h5ad",
    "sparse",
]
categories = [
    "science::computational-biology",
    "science::bioinformatics",
    "mathematics",
    "algorithms",
]
license = "MIT"
repository = "https://github.com/GregorLueg/bixverse-rs"

[package.metadata.docs.rs]
features = [
    "h5",
    "hdf5-static",
    "hdf5-filters",
    "parquet",
]

[features]
analysis = [
    "dep:bixverse-core",
    "dep:faer",
]
default = ["analysis"]
h5 = [
    "dep:hdf5",
    "dep:hdf5-sys",
    "dep:ndarray",
]
hdf5-filters = [
    "h5",
    "hdf5/lzf",
    "hdf5/blosc-lz4",
    "hdf5/blosc-zlib",
    "hdf5/blosc-zstd",
]
hdf5-static = [
    "h5",
    "hdf5/static",
]
parquet = [
    "h5",
    "dep:parquet",
]

[lib]
name = "bixverse_sc_data"
path = "src/lib.rs"

[dependencies.approx]
version = "0.5.1"

[dependencies.bincode]
version = "2.0.1"
features = ["serde"]

[dependencies.bixverse-core]
version = "0.9.4"
optional = true
default-features = false

[dependencies.bixverse-sparse]
version = "0.9.4"
default-features = false

[dependencies.document-features]
version = "0.2.12"

[dependencies.faer]
version = "0.24.4"
features = [
    "std",
    "rayon",
    "sparse-linalg",
    "rand",
]
optional = true
default-features = false

[dependencies.flate2]
version = "1.1.9"
features = ["zlib-rs"]
default-features = false

[dependencies.half]
version = "2.7.1"

[dependencies.hdf5]
version = "0.15.0"
features = ["zlib"]
optional = true
package = "hdf5-metno"

[dependencies.hdf5-sys]
version = "0.12.4"
optional = true
package = "hdf5-metno-sys"

[dependencies.indexmap]
version = "2.13.0"

[dependencies.lz4_flex]
version = "0.12.0"

[dependencies.memmap2]
version = "0.9.9"

[dependencies.ndarray]
version = "0.17.2"
optional = true

[dependencies.num-traits]
version = "0.2.19"

[dependencies.parquet]
version = "60.0.0"
features = ["zstd"]
optional = true
default-features = false

[dependencies.rand]
version = "0.9.2"

[dependencies.rand_distr]
version = "0.5.1"

[dependencies.rayon]
version = "1.11.0"

[dependencies.rustc-hash]
version = "2.1.1"

[dependencies.serde]
version = "1.0"
features = ["derive"]

[dependencies.thiserror]
version = "2.0.18"

[dependencies.thousands]
version = "0.2.0"

[dependencies.zstd]
version = "0.14.0"

[target."cfg(unix)".dependencies.libc]
version = "0.2.178"