bixverse-rs 0.4.7

A Rust library with various utilities for computational biology and single cell.
Documentation 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22

//! Bixverse specific single cell and meta cell-specific 'omics module. Contains
//! all of the methods to run large scale single cell experiments locally while
//! reducing memory pressure.

pub mod mc_analysis;
pub mod mc_generation;
pub mod mc_processing;
pub mod sc_analysis;
pub mod sc_annotation;
pub mod sc_batch_correction;
pub mod sc_data;
pub mod sc_processing;
pub mod sc_r_wrappers;
pub mod sc_traits;
pub mod sc_trajectory;
pub mod sc_utils;

#[cfg(feature = "multi-modal")]
pub mod multi_modal;

/// How many cells to read in per given batch - global constant
pub const CELL_BATCH_SIZE: usize = 50_000;