biovault 0.1.21

A bioinformatics data vault CLI tool
Documentation 
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[[bin]]
name = "bv"
path = "src/main.rs"

[build-dependencies.serde]
features = ["derive"]
version = "1.0"

[build-dependencies.serde_yaml]
version = "0.9"

[dependencies.anyhow]
version = "1.0"

[dependencies.base64]
version = "0.22"

[dependencies.blake3]
features = ["rayon"]
version = "1.5"

[dependencies.chrono]
features = ["serde"]
version = "0.4"

[dependencies.clap]
features = ["derive", "env"]
version = "4.5"

[dependencies.colored]
version = "2.1"

[dependencies.dialoguer]
version = "0.11"

[dependencies.dirs]
version = "5.0"

[dependencies.flate2]
version = "1.0"

[dependencies.futures-util]
version = "0.3"

[dependencies.glob]
version = "0.3"

[dependencies.hex]
version = "0.4"

[dependencies.include_dir]
version = "0.7"

[dependencies.indicatif]
version = "0.17"

[dependencies.lazy_static]
version = "1.4"

[dependencies.rand]
version = "0.8"

[dependencies.regex]
version = "1.10"

[dependencies.reqwest]
default-features = false
features = ["rustls-tls", "stream", "json"]
version = "0.12"

[dependencies.rusqlite]
features = ["bundled", "chrono"]
version = "0.32"

[dependencies.self_update]
default-features = false
features = ["archive-tar", "compression-flate2", "rustls"]
version = "0.41"

[dependencies.semver]
version = "1.0"

[dependencies.serde]
features = ["derive"]
version = "1.0"

[dependencies.serde_json]
version = "1.0"

[dependencies.serde_yaml]
version = "0.9"

[dependencies.sysinfo]
version = "0.30"

[dependencies.tempfile]
version = "3.12"

[dependencies.thiserror]
version = "1.0"

[dependencies.tokio]
features = ["full"]
version = "1.40"

[dependencies.tracing]
version = "0.1"

[dependencies.tracing-subscriber]
features = ["env-filter"]
version = "0.3"

[dependencies.uuid]
features = ["v4"]
version = "1.10"

[dependencies.walkdir]
version = "2.4"

[dependencies.which]
version = "6.0"

[dev-dependencies.assert_cmd]
version = "2.0"

[dev-dependencies.predicates]
version = "3.1"

[dev-dependencies.reqwest]
default-features = false
features = ["blocking", "rustls-tls"]
version = "0.12"

[dev-dependencies.serial_test]
version = "3.1"

[dev-dependencies.tempfile]
version = "3.12"

[lib]
name = "biovault"
path = "src/lib.rs"

[package]
authors = ["Madhava Jay <madhava@openmined.org>"]
autobenches = false
autobins = false
autoexamples = false
autolib = false
autotests = false
build = "build.rs"
categories = ["command-line-utilities", "science"]
description = "A bioinformatics data vault CLI tool"
edition = "2021"
keywords = ["bioinformatics", "cli", "data", "vault"]
license = "Apache-2.0"
name = "biovault"
readme = false
repository = "https://github.com/openmined/biovault"
version = "0.1.21"

[[test]]
name = "cli_test"
path = "tests/cli_test.rs"

[[test]]
name = "integration_test"
path = "tests/integration_test.rs"