biov 0.1.36

A uv-style tool manager for bioinformatics: reproducible Docker-backed tools with digest-pinned lockfiles (installs as `bv`)
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "biov"
version = "0.1.36"
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A uv-style tool manager for bioinformatics: reproducible Docker-backed tools with digest-pinned lockfiles (installs as `bv`)"
homepage = "https://github.com/tejasprabhune/bv"
readme = "README.md"
keywords = [
    "bioinformatics",
    "docker",
    "reproducibility",
    "cli",
    "containers",
]
categories = [
    "command-line-utilities",
    "science",
]
license = "Apache-2.0"
repository = "https://github.com/tejasprabhune/bv"
resolver = "2"

[[bin]]
name = "bv"
path = "src/main.rs"

[[test]]
name = "integration"
path = "tests/integration.rs"

[dependencies.anyhow]
version = "1.0.102"

[dependencies.base64]
version = "0.22"

[dependencies.bv-builder]
version = "0.1.0"

[dependencies.bv-conformance]
version = "0.1.1"

[dependencies.bv-core]
version = "0.1.0"

[dependencies.bv-index]
version = "0.1.0"

[dependencies.bv-runtime]
version = "0.1.0"

[dependencies.bv-runtime-apptainer]
version = "0.1.1"

[dependencies.bv-types]
version = "0.1.0"

[dependencies.chrono]
version = "0.4.44"
features = ["serde"]

[dependencies.clap]
version = "4.6.1"
features = [
    "derive",
    "env",
]

[dependencies.flate2]
version = "1.1.9"

[dependencies.futures-util]
version = "0.3"

[dependencies.indicatif]
version = "0.18.4"

[dependencies.inquire]
version = "0.9.4"

[dependencies.keyring]
version = "3"

[dependencies.owo-colors]
version = "4.3.0"
features = ["supports-colors"]

[dependencies.reqwest]
version = "0.13"
features = [
    "stream",
    "rustls",
    "json",
    "query",
]
default-features = false

[dependencies.semver]
version = "1.0.28"
features = ["serde"]

[dependencies.serde]
version = "1.0.228"
features = ["derive"]

[dependencies.serde_json]
version = "1.0.149"

[dependencies.sha2]
version = "0.11.0"

[dependencies.tar]
version = "0.4"

[dependencies.tempfile]
version = "3.27.0"

[dependencies.tokio]
version = "1.52.1"
features = [
    "rt-multi-thread",
    "macros",
    "sync",
]

[dependencies.toml]
version = "1.1.2"

[dependencies.tracing]
version = "0.1.44"

[dependencies.tracing-subscriber]
version = "0.3.23"
features = ["env-filter"]

[dev-dependencies.filetime]
version = "0.2"

[dev-dependencies.insta]
version = "1.47.2"