1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
pub mod amino;
pub mod dna;
pub mod iupac;
use std::fmt;
use bio_seq_derive::Codec;
pub use dna::Dna;
pub trait Codec: Copy + Clone + Into<u8> {
type Error;
const WIDTH: u8;
fn unsafe_from_bits(b: u8) -> Self;
fn try_from_bits(b: u8) -> Result<Self, Self::Error>;
fn from_char(c: char) -> Result<Self, Self::Error>;
fn to_char(self) -> char;
}
#[derive(Debug, Clone)]
pub struct ParseBioErr;
impl fmt::Display for ParseBioErr {
fn fmt(&self, f: &mut fmt::Formatter) -> fmt::Result {
write!(f, "Could not encode")
}
}
#[cfg(test)]
mod tests {
use super::dna::Dna;
use super::iupac::Iupac;
#[test]
fn dna_to_iupac() {
assert_eq!(Iupac::from(Dna::A), Iupac::A);
assert_ne!(Iupac::from(Dna::A), Iupac::T);
assert_eq!(Iupac::from(Dna::C), Iupac::C);
}
}