Comprehensive Rust tools for BIDS (Brain Imaging Data Structure) datasets.

This is the umbrella crate that re-exports all bids-* sub-crates, providing a single dependency for full BIDS dataset support. It is the Rust equivalent of the PyBIDS Python package.

Quick Start

use bids::{BidsLayout, BidsFile};

let layout = BidsLayout::new("/path/to/bids/dataset").unwrap();
let files = layout.get()
    .suffix("bold")
    .extension(".nii.gz")
    .subject("01")
    .collect()
    .unwrap();

for f in &files {
    println!("{}: {:?}", f.filename, f.entities);
}

Crate Organization

• Core ([core]) — Fundamental types: files, entities, metadata, config, errors
• I/O ([io]) — TSV/JSON reading, path building, file writing
• Layout ([layout]) — Dataset indexing and fluent query API
• Variables ([variables]) — BIDS variable system for statistical modeling
• Modeling ([modeling]) — BIDS-StatsModels, HRF functions, transformations
• Reports ([reports]) — Auto-generated methods sections
• Domain crates — Modality-specific support (EEG, MEG, PET, etc.)
• Infrastructure — NIfTI parsing, signal filtering, formula parsing, schema validation

Feature Flags