bed-reader 0.2.34

Read and write the PLINK BED format, simply and efficiently.
Documentation 
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# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html



[package]

version = "0.2.34"

name = "bed-reader"

description = "Read and write the PLINK BED format, simply and efficiently."

repository = "https://github.com/fastlmm/bed-reader"

readme = "README-rust.md"

documentation = "https://docs.rs/bed-reader/latest/bed_reader/"

authors = ["FaST-LMM Team <fastlmm-dev@python.org>"]

exclude = ["tests/*", "doc/*", "docs/*"]

license = "Apache-2.0"

keywords = ["bioinformatics", "plink", "genomics", "genotype", "snps"]

categories = ["science"]

edition = "2021"

homepage = "https://fastlmm.github.io/"





[lib]

name = "bed_reader"

crate-type = ["cdylib", "rlib"]



[features]

# https://github.com/PyO3/pyo3/discussions/2271

# https://pyo3.rs/latest/faq.html#i-cant-run-cargo-test-or-i-cant-build-in-a-cargo-workspace-im-having-linker-issues-like-symbol-not-found-or-undefined-reference-to-_pyexc_systemerror

extension-module = ["pyo3/extension-module"]

default = ["extension-module"]



[dependencies]

thiserror = "1.0.40"

num-traits = "0.2.15"

ndarray-npy = { version = "0.8.1", default-features = false }

rayon = "1.7.0"

numpy = "0.18.0"

ndarray = { version = "0.15.6", features = ["approx", "rayon"] }

approx = "0.5.1"

statrs = "0.16.0"

byteorder = { version = "1.4.3", default-features = false }

pyo3 = { version = "0.18.3", features = ["extension-module"], optional = true }

dpc-pariter = "0.4.0"                                                           # //  pariter = "0.5.1"

derive_builder = "0.12.0"

temp_testdir = "0.2.3"

ureq = { version = "2.6.2", features = [] }

directories = "5.0.1"

sha2 = "0.10.6"

base16ct = { version = "0.2.0", features = ["alloc"] }

ctor = "0.2.0"

anyinput = { version = "0.1.6", features = ["ndarray"] }

fetch-data = "0.1.6"



[dev-dependencies]

ndarray-rand = "0.14.0"



[build-dependencies]

pyo3-build-config = "0.18.3"