basemind 0.22.1

Full AI context layer over MCP — tree-sitter code-map, document RAG (PDF/Office/HTML/email + OCR + reranker), shared agent memory, on-demand web crawl, git history + blame + per-symbol diff. 300+ languages, 10+ coding-agent harnesses, content-addressed Fjall + LanceDB.
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
//! Code-search branch helpers for the scanner (`code-search` feature).
//!
//! Mirrors `scanner_docs.rs` but for source files: after a file's L1/L2 filemap is written,
//! [`chunk_and_embed`] derives [`crate::chunk::CodeChunk`]s from the cached extraction + source
//! bytes (no re-parse), embeds each chunk's `searchable_text`, persists a content-addressed
//! `.chunk.msgpack` sidecar (the embedding cache), and hands back a [`PendingCodeBatch`] carrying
//! only lightweight metadata (path + blob hash + embedding dim) — never the LanceDB rows. The
//! single-threaded apply pass drains those descriptors and [`flush_code_batches`] re-reads each
//! file's sidecar to rebuild + write its rows one file at a time.
//!
//! The embed compute runs in the parallel per-file worker; the LanceDB write is deferred + serial
//! — exactly the document-tier pattern. Deferring the row-building (not just the write) keeps peak
//! embed-write RAM at one file's rows, independent of corpus size.

#![cfg(feature = "code-search")]

use anyhow::Result;

use crate::chunk::{ChunkOptions, CodeChunkBlob, chunk_file};
use crate::config::Config;
use crate::embeddings::SharedEmbedder;
use crate::extract::{FileMapL1, FileMapL2, SCHEMA_VER};
use crate::lance::CodeRow;
use crate::scanner::EmbedMode;
use crate::search::bm25::{ChunkPosting, build_chunk_postings};
use crate::store::Store;

/// Per-file deferred-LanceDB-write descriptor for the code-search tier. Built inside the parallel
/// worker; consumed by [`flush_code_batches`] in the single-threaded apply pass.
///
/// Metadata only: it carries the content hash needed to re-read the persisted `.chunk.msgpack`
/// sidecar at flush time, NOT the `CodeRow`s or their embedding vectors. Holding the vectors here
/// (one `Vec<f32>` per chunk, across the whole corpus) was the memory leak this shape fixes.
///
/// The `bm25` postings are the exception — they are consumed by the worker itself (staged into
/// Fjall immediately after this descriptor is built) and cleared before the descriptor is
/// accumulated, so they never ride along the corpus-wide Vec either.
#[derive(Debug, Clone)]
pub(crate) struct PendingCodeBatch {
    /// Repository-relative path, forward-slash separated.
    pub rel_path: String,
    /// Content hash (hex) of the source file — the key under which the `.chunk.msgpack` sidecar is
    /// content-addressed. The flush re-reads that sidecar to rebuild rows on demand.
    pub blob_hash: String,
    /// Embedding vector length; `0` when embeddings were disabled (no rows to emit — BM25-only).
    pub embedding_dim: u16,
    /// BM25 keyword postings for this file's chunks — staged into the Fjall index by the worker
    /// (via [`crate::index::writer::IndexWriter::upsert_bm25_file`]), independent of embeddings, then
    /// cleared so the accumulated descriptor stays metadata-only.
    pub bm25: Vec<ChunkPosting>,
}

/// Feature + config gate: chunk this scan only when `[code_search] enabled`.
pub(crate) fn should_chunk(config: &Config) -> bool {
    config.code_search.enabled
}

/// A rows-empty [`PendingCodeBatch`] (`embedding_dim: 0`) carrying only the BM25 postings for
/// `chunks` — the graceful-degradation result when embeddings were requested but the embedder was
/// unavailable. `None` for a chunkless file (nothing to index).
fn bm25_batch_from_chunks(rel: &str, blob_hash: &str, chunks: &[crate::chunk::CodeChunk]) -> Option<PendingCodeBatch> {
    if chunks.is_empty() {
        return None;
    }
    Some(PendingCodeBatch {
        rel_path: rel.to_string(),
        blob_hash: blob_hash.to_string(),
        embedding_dim: 0,
        bm25: build_chunk_postings(chunks),
    })
}

/// True when a cached code-chunk blob can be reused as-is: identical content already chunked +
/// embedded under the current preset. Both the embedding **dimension** AND the **model/preset** must
/// match — `balanced` and `multilingual` share dim 768, so a dim-only check would falsely reuse
/// stale-model vectors across that switch — and the blob must actually carry one embedding per chunk.
/// Mirrors the documents tier's `scanner_docs::cached_doc_is_reusable`.
fn code_cache_is_reusable(blob: &CodeChunkBlob, dim: u16, preset: &str) -> bool {
    blob.embedding_dim == dim
        && blob.embedding_model == preset
        && !blob.chunks.is_empty()
        && blob.embeddings.len() == blob.chunks.len()
}

/// Chunk + embed one source file. Reuses the `.chunk` sidecar when an identical-content blob
/// already exists (the embedding cache); otherwise chunks, embeds in bulk, and writes the blob.
/// Returns `Ok(None)` when the file yields no chunks. Never opens LanceDB — the write is deferred.
#[allow(clippy::too_many_arguments)]
pub(crate) fn chunk_and_embed(
    store: &Store,
    rel: &str,
    bytes: &[u8],
    l1: &FileMapL1,
    l2: Option<&FileMapL2>,
    hash_hex: &str,
    config: &Config,
    mode: EmbedMode,
) -> Result<Option<PendingCodeBatch>> {
    let cfg = &config.code_search;
    let embed = matches!(mode, EmbedMode::Inline)
        && cfg.embed
        && !crate::scanner_filter::embed_excluded(rel, &cfg.embed_exclude);
    let opts = ChunkOptions {
        max_characters: cfg.max_characters,
        overlap: cfg.overlap,
    };
    let cached = store.read_chunks_by_hex(hash_hex).ok().flatten();

    if !embed {
        let chunks = match cached {
            Some(blob) => blob.chunks,
            None => {
                let chunks = chunk_file(rel, hash_hex, l1, l2, bytes, opts);
                let blob = CodeChunkBlob {
                    schema_ver: SCHEMA_VER,
                    embedding_dim: 0,
                    embedding_model: String::new(),
                    chunks: chunks.clone(),
                    embeddings: Vec::new(),
                };
                if let Err(error) = store.write_chunks_hex(hash_hex, &blob) {
                    tracing::warn!(rel, ?error, "write code-chunk sidecar (chunk-only) failed");
                }
                chunks
            }
        };
        if chunks.is_empty() {
            return Ok(None);
        }
        let bm25 = build_chunk_postings(&chunks);
        return Ok(Some(PendingCodeBatch {
            rel_path: rel.to_string(),
            blob_hash: hash_hex.to_string(),
            embedding_dim: 0,
            bm25,
        }));
    }

    let embedder = match SharedEmbedder::load(
        &config.documents.embedding_preset,
        config
            .resources
            .effective_embed_threads(config.documents.embed_max_threads),
        config.resources.embed_batch_size,
    ) {
        Ok(embedder) => embedder,
        Err(error) => {
            tracing::warn!(
                rel,
                ?error,
                "load code-search embedder failed; indexing BM25 keyword lane only"
            );
            let chunks = match cached {
                Some(blob) if !blob.chunks.is_empty() => blob.chunks,
                _ => chunk_file(rel, hash_hex, l1, l2, bytes, opts),
            };
            return Ok(bm25_batch_from_chunks(rel, hash_hex, &chunks));
        }
    };
    let dim = embedder.dim();

    if let Some(blob) = &cached
        && code_cache_is_reusable(blob, dim, &config.documents.embedding_preset)
    {
        let bm25 = build_chunk_postings(&blob.chunks);
        return Ok(Some(PendingCodeBatch {
            rel_path: rel.to_string(),
            blob_hash: hash_hex.to_string(),
            embedding_dim: dim,
            bm25,
        }));
    }

    let chunks = chunk_file(rel, hash_hex, l1, l2, bytes, opts);
    if chunks.is_empty() {
        let blob = CodeChunkBlob {
            schema_ver: SCHEMA_VER,
            embedding_dim: 0,
            embedding_model: String::new(),
            chunks: Vec::new(),
            embeddings: Vec::new(),
        };
        if let Err(error) = store.write_chunks_hex(hash_hex, &blob) {
            tracing::warn!(rel, ?error, "write empty code-chunk sidecar failed");
        }
        return Ok(None);
    }
    let texts: Vec<&str> = chunks.iter().map(|c| c.searchable_text.as_str()).collect();
    crate::backpressure::FootprintGate::new(config.resources.max_footprint_mb).admit();
    let embeddings = match embedder.embed_batch(&texts) {
        Ok(embeddings) if embeddings.len() == chunks.len() => embeddings,
        Ok(embeddings) => {
            tracing::warn!(
                rel,
                got = embeddings.len(),
                want = chunks.len(),
                "embedder returned wrong vector count; indexing BM25 keyword lane only"
            );
            return Ok(bm25_batch_from_chunks(rel, hash_hex, &chunks));
        }
        Err(error) => {
            tracing::warn!(rel, ?error, "embed code chunks failed; indexing BM25 keyword lane only");
            return Ok(bm25_batch_from_chunks(rel, hash_hex, &chunks));
        }
    };
    let bm25 = build_chunk_postings(&chunks);
    let blob = CodeChunkBlob {
        schema_ver: SCHEMA_VER,
        embedding_dim: dim,
        embedding_model: config.documents.embedding_preset.clone(),
        chunks,
        embeddings,
    };
    if let Err(error) = store.write_chunks_hex(hash_hex, &blob) {
        tracing::warn!(rel, ?error, "write code-chunk sidecar failed; embedding cache skipped");
    }
    Ok(Some(PendingCodeBatch {
        rel_path: rel.to_string(),
        blob_hash: hash_hex.to_string(),
        embedding_dim: dim,
        bm25,
    }))
}

/// Assemble the LanceDB rows for a file's chunks + embeddings (parallel arrays), **consuming** both
/// so the chunk text and embedding vectors move into the rows instead of being cloned. Called at
/// flush time with the owned sidecar blob; `scope` is stamped directly (no second pass needed).
fn build_rows_owned(
    rel: &str,
    scope: &str,
    chunks: Vec<crate::chunk::CodeChunk>,
    embeddings: Vec<Vec<f32>>,
) -> Vec<CodeRow> {
    chunks
        .into_iter()
        .zip(embeddings)
        .map(|(c, emb)| CodeRow {
            scope: scope.to_string(),
            path: rel.to_string(),
            chunk_id: c.chunk_id,
            symbol: c.symbol.unwrap_or_default(),
            kind: c.kind.unwrap_or_default(),
            lang: c.lang,
            line_start: c.line_start,
            line_end: c.line_end,
            byte_start: c.byte_start,
            byte_end: c.byte_end,
            text: c.text,
            embedding: emb,
        })
        .collect()
}

/// Delete the `code_chunks` rows of files that no longer exist (or are no longer allowed). Runs in
/// the serial apply pass after the batch flush, so it reuses an already-open LanceStore when the
/// same scan wrote chunks. Best-effort: never opens (i.e. never *creates*) the vector store when it
/// does not already exist, and logs — never propagates — a delete failure.
pub(crate) fn delete_stale_code_chunks(store: &mut Store, config: &Config, scope: &str, stale: &[String]) {
    if stale.is_empty() || !should_chunk(config) {
        return;
    }
    if store.lance.is_none() && !store.lance_dir_exists() {
        return;
    }
    let model = &config.documents.embedding_preset;
    let dim = match SharedEmbedder::load(model, 0, config.resources.embed_batch_size) {
        Ok(embedder) => embedder.dim(),
        Err(error) => {
            tracing::warn!(?error, preset = %model, "code-chunk stale purge: unknown embedding preset; skipping");
            return;
        }
    };
    let lance = match store.lance_or_open(dim, model) {
        Ok(lance) => lance.clone(),
        Err(error) => {
            tracing::warn!(?error, "code-chunk stale purge: open LanceStore failed; skipping");
            return;
        }
    };
    for path in stale {
        if let Err(error) = lance.delete_code_chunks(scope, path) {
            tracing::warn!(
                rel = %path,
                ?error,
                "code-chunk stale purge failed; search_code may return a removed path"
            );
        }
    }
}

/// Stream every pending code batch into the `code_chunks` LanceDB table, one file at a time. Opens
/// the store lazily — if no batch carries vectors (embeddings off) no LanceDB connection is made.
///
/// For each embedded file this re-reads the file's already-persisted `.chunk.msgpack` sidecar,
/// rebuilds its rows, writes them, and drops them before the next file — so peak embed-write RAM is
/// one file's rows plus one Arrow batch, independent of corpus size. (The sidecar is guaranteed on
/// disk here: every `embedding_dim > 0` batch either wrote it in `chunk_and_embed` or reused an
/// existing one, both before this post-barrier lane runs.)
///
/// Errors are logged and skipped per file so one malformed embedding never aborts the scan. Returns
/// the number of files for which rows were written.
pub(crate) fn flush_code_batches(
    store: &mut Store,
    scope: &str,
    batches: Vec<PendingCodeBatch>,
    embedding_model: &str,
) -> usize {
    let Some(dim) = batches.iter().find(|b| b.embedding_dim > 0).map(|b| b.embedding_dim) else {
        return 0;
    };
    match SharedEmbedder::load(
        embedding_model,
        0,
        crate::config::ResourcesConfig::default().embed_batch_size,
    ) {
        Ok(embedder) if embedder.dim() != dim => {
            tracing::error!(
                preset = %embedding_model,
                expected = embedder.dim(),
                actual = dim,
                "preset/runtime dim mismatch — refusing to write code_chunks batch"
            );
            return 0;
        }
        Ok(_) => {}
        Err(error) => {
            tracing::error!(?error, preset = %embedding_model, "unknown embedding preset — refusing to write code_chunks batch");
            return 0;
        }
    }

    let lance = match store.lance_or_open(dim, embedding_model) {
        Ok(s) => s.clone(),
        Err(error) => {
            tracing::error!(?error, "open LanceStore for code_chunks batch failed");
            return 0;
        }
    };

    let mut inserted = 0usize;
    for batch in batches {
        if batch.embedding_dim == 0 {
            continue;
        }
        let blob = match store.read_chunks_by_hex(&batch.blob_hash) {
            Ok(Some(blob)) if blob.embedding_dim == dim && blob.embeddings.len() == blob.chunks.len() => blob,
            Ok(Some(_)) => {
                continue;
            }
            Ok(None) => {
                tracing::warn!(rel = %batch.rel_path, "chunk sidecar missing at flush; skipping vector rows");
                continue;
            }
            Err(error) => {
                tracing::warn!(rel = %batch.rel_path, ?error, "re-read chunk sidecar failed; skipping vector rows");
                continue;
            }
        };
        if blob.chunks.is_empty() {
            continue;
        }
        let rows = build_rows_owned(&batch.rel_path, scope, blob.chunks, blob.embeddings);
        match lance.replace_code_chunks(scope, &batch.rel_path, rows) {
            Ok(()) => inserted += 1,
            Err(error) => {
                tracing::warn!(rel = %batch.rel_path, ?error, "lance replace_code_chunks failed; code search may be incomplete");
            }
        }
    }
    inserted
}

#[cfg(test)]
mod tests {
    use super::*;
    use crate::chunk::CodeChunk;

    fn chunk(chunk_id: &str, searchable_text: &str) -> CodeChunk {
        CodeChunk {
            chunk_id: chunk_id.to_string(),
            path: "src/lib.rs".to_string(),
            lang: "rust".to_string(),
            kind: None,
            symbol: None,
            signature: None,
            doc: None,
            byte_start: 0,
            byte_end: 0,
            line_start: 1,
            line_end: 1,
            text: searchable_text.to_string(),
            searchable_text: searchable_text.to_string(),
        }
    }

    #[test]
    fn bm25_batch_from_chunks_is_rows_empty_with_postings() {
        let batch = bm25_batch_from_chunks("src/lib.rs", "deadbeef", &[chunk("h:0", "alpha beta alpha")])
            .expect("non-empty chunks must yield a batch");
        assert_eq!(batch.rel_path, "src/lib.rs");
        assert_eq!(
            batch.blob_hash, "deadbeef",
            "carries the content hash for the flush re-read"
        );
        assert_eq!(batch.embedding_dim, 0, "no embeddings on the degraded path");
        assert_eq!(batch.bm25.len(), 1, "one posting per chunk");
        assert_eq!(batch.bm25[0].doclen, 3, "three tokens incl. the repeat");
    }

    #[test]
    fn bm25_batch_from_chunks_is_none_for_chunkless_file() {
        assert!(bm25_batch_from_chunks("src/empty.rs", "deadbeef", &[]).is_none());
    }

    /// Structural regression guard for the streaming-flush memory fix: the accumulated per-file
    /// descriptor must stay metadata-only. This exhaustive struct literal names EXACTLY the metadata
    /// fields — re-introducing a `rows: Vec<CodeRow>` (or any embedding payload) field would break
    /// this compile, catching a regression back to the corpus-wide accumulation that leaked GBs.
    #[test]
    fn pending_code_batch_is_metadata_only() {
        let batch = PendingCodeBatch {
            rel_path: "src/lib.rs".to_string(),
            blob_hash: "deadbeef".to_string(),
            embedding_dim: 768,
            bm25: Vec::new(),
        };
        assert_eq!(batch.embedding_dim, 768);
    }

    fn embedded_blob(model: &str, dim: u16) -> CodeChunkBlob {
        CodeChunkBlob {
            schema_ver: 0,
            embedding_dim: dim,
            embedding_model: model.to_string(),
            chunks: vec![chunk("h:0", "alpha")],
            embeddings: vec![vec![0.0_f32; dim as usize]],
        }
    }

    #[test]
    fn code_cache_reuse_requires_matching_dim_and_model() {
        let blob = embedded_blob("balanced", 768);
        assert!(code_cache_is_reusable(&blob, 768, "balanced"));
        assert!(
            !code_cache_is_reusable(&blob, 768, "multilingual"),
            "same-dim different-model must miss and force a re-embed"
        );
        assert!(!code_cache_is_reusable(&blob, 384, "balanced"));
        assert!(!code_cache_is_reusable(&embedded_blob("", 768), 768, "balanced"));
    }

    #[test]
    fn code_cache_reuse_rejects_chunkless_or_unembedded_blob() {
        let mut blob = embedded_blob("balanced", 768);
        blob.chunks.clear();
        blob.embeddings.clear();
        assert!(!code_cache_is_reusable(&blob, 768, "balanced"));
        let chunk_only = CodeChunkBlob {
            schema_ver: 0,
            embedding_dim: 768,
            embedding_model: "balanced".to_string(),
            chunks: vec![chunk("h:0", "alpha")],
            embeddings: Vec::new(),
        };
        assert!(!code_cache_is_reusable(&chunk_only, 768, "balanced"));
    }
}