bamnado 0.6.1

Tools and utilities for manipulation of BAM files for unusual use cases. e.g. single cell, MCC
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "bamnado"
version = "0.6.1"
authors = ["Alastair Smith <alastair.smith@ndcls.ox.ac.uk>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Tools and utilities for manipulation of BAM files for unusual use cases. e.g. single cell, MCC"
homepage = "https://github.com/alsmith151/BamNado"
readme = "README.md"
keywords = [
    "bioinformatics",
    "scATAC-seq",
    "MCC",
]
license = "MIT OR Apache-2.0"
repository = "https://github.com/alsmith151/BamNado"
resolver = "2"

[lib]
name = "bamnado"
crate-type = ["rlib"]
path = "src/lib.rs"

[[bin]]
name = "bamnado"
path = "src/main.rs"

[dependencies.ahash]
version = "0.8.12"

[dependencies.anstyle]
version = "1.0.11"

[dependencies.anyhow]
version = "1.0.98"

[dependencies.bigtools]
version = "0.5.6"

[dependencies.bio]
version = "3.0.0"

[dependencies.bio-types]
version = "1.0.1"

[dependencies.clap]
version = "4.5.53"
features = ["derive"]

[dependencies.colog]
version = "1.3.0"

[dependencies.comfy-table]
version = "7.2.1"

[dependencies.crossbeam]
version = "0.8.4"

[dependencies.futures]
version = "0.3.31"

[dependencies.indicatif]
version = "0.18.3"
features = ["rayon"]

[dependencies.itertools]
version = "0.14.0"

[dependencies.log]
version = "0.4.29"

[dependencies.ndarray]
version = "0.17.1"

[dependencies.ndarray-stats]
version = "0.7.0"

[dependencies.noodles]
version = "0.103.0"
features = [
    "bgzf",
    "cram",
    "bed",
    "core",
    "csi",
    "async",
    "sam",
    "bam",
]

[dependencies.polars]
version = "0.51.0"
features = [
    "lazy",
    "polars-ops",
    "cum_agg",
    "abs",
]

[dependencies.rayon]
version = "1.10.0"

[dependencies.regex]
version = "1.10.7"

[dependencies.rust-lapper]
version = "1.1.0"

[dependencies.serde]
version = "1.0.219"
features = ["derive"]

[dependencies.serde_json]
version = "1.0.140"

[dependencies.sprs]
version = "0.11.4"

[dependencies.tempfile]
version = "3.20.0"

[dependencies.tokio]
version = "1.45.1"