atglib 0.2.0

A library to handle transcripts for genomics and transcriptomics
Documentation
NM_001354750.2	chr11	+	113930432	114127487	113934022	114121277	7	113930432,113933932,114027058,114057673,114112888,114117919,114121047,	113930864,113935290,114027156,114057760,114113059,114118087,114127487,	0	ZBTB16	cmpl	cmpl	-1,0,2,1,1,1,1,
NM_001354751.2	chr11	+	113930963	114127487	113934022	114121277	7	113930963,113933932,114027058,114057673,114112888,114117919,114121047,	113931016,113935290,114027156,114057760,114113059,114118087,114127487,	0	ZBTB16	cmpl	cmpl	-1,0,2,1,1,1,1,
NM_006006.6	chr11	+	113930432	114127487	113934022	114121277	7	113930432,113933932,114027058,114057673,114112888,114117919,114121047,	113930604,113935290,114027156,114057760,114113059,114118087,114127487,	0	ZBTB16	cmpl	cmpl	-1,0,2,1,1,1,1,
NM_001354752.1	chr11	+	113933932	114127492	113934022	114121277	5	113933932,114027058,114112888,114117919,114121047,	113935290,114027156,114113059,114118087,114127492,	0	ZBTB16	cmpl	cmpl	0,2,1,1,1,
NM_001321079.2	chr17	-	40852292	40897058	40854549	40897035	20	40852292,40854894,40855757,40856619,40857105,40858024,40859975,40860893,40861863,40864306,40865226,40869993,40870471,40871122,40872290,40874812,40876322,40879652,40880842,40897028,	40854610,40854979,40855838,40856701,40857201,40858203,40860101,40860934,40861955,40864503,40865407,40870085,40870635,40871225,40872467,40874933,40876442,40879781,40880970,40897058,	0	EZH1	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,1,0,
NM_001321081.2	chr17	-	40852292	40897058	40854549	40880959	21	40852292,40854894,40855757,40856619,40857105,40858024,40859975,40860893,40861863,40864306,40865226,40869993,40870471,40871122,40872290,40874812,40876322,40879679,40880842,40882845,40897028,	40854610,40854979,40855838,40856701,40857201,40858203,40860101,40860934,40861955,40864503,40865407,40870085,40870635,40871225,40872467,40874933,40876442,40879781,40880970,40882936,40897058,	0	EZH1	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,-1,
NM_001321082.2	chr17	-	40852292	40897058	40854549	40880959	20	40852292,40854894,40855757,40856619,40857105,40858024,40859975,40860893,40861863,40864306,40865226,40869993,40870471,40871122,40872290,40874812,40879652,40880842,40882845,40897028,	40854610,40854979,40855838,40856701,40857201,40858203,40860101,40860934,40861955,40864503,40865407,40870085,40870635,40871225,40872467,40874933,40879781,40880970,40882936,40897058,	0	EZH1	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,-1,-1,
NM_001991.5	chr17	-	40852292	40897058	40854549	40880959	21	40852292,40854894,40855757,40856619,40857105,40858024,40859975,40860893,40861863,40864306,40865226,40869993,40870471,40871122,40872290,40874812,40876322,40879652,40880842,40882845,40897028,	40854610,40854979,40855838,40856701,40857201,40858203,40860101,40860934,40861955,40864503,40865407,40870085,40870635,40871225,40872467,40874933,40876442,40879781,40880970,40882936,40897058,	0	EZH1	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,-1,
NM_001203247.2	chr7	-	148504474	148581383	148504737	148544390	20	148504474,148506162,148506401,148507424,148508716,148511050,148512005,148512597,148513775,148514313,148514968,148516687,148523560,148524255,148525831,148526819,148529725,148543561,148544273,148581255,	148504798,148506247,148506482,148507506,148508812,148511229,148512131,148512638,148513870,148514483,148515209,148516779,148523724,148524358,148525972,148526940,148529842,148543690,148544397,148581383,	0	EZH2	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,
NM_001203248.2	chr7	-	148504474	148581383	148504737	148544390	20	148504474,148506162,148506401,148507424,148508716,148511050,148512005,148512597,148513775,148514313,148514968,148516687,148523560,148524255,148525831,148526819,148529725,148543588,148544273,148581255,	148504798,148506247,148506482,148507506,148508812,148511229,148512131,148512638,148513870,148514483,148515209,148516779,148523724,148524358,148525972,148526940,148529842,148543690,148544397,148581383,	0	EZH2	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,
NM_001203249.2	chr7	-	148504474	148580577	148504737	148544390	19	148504474,148506162,148506401,148507424,148508716,148511050,148512597,148513775,148514313,148514968,148516687,148523560,148524255,148525831,148526819,148529725,148543588,148544273,148580288,	148504798,148506247,148506482,148507506,148508812,148511229,148512638,148513870,148514483,148515209,148516779,148523724,148524358,148525972,148526940,148529842,148543690,148544397,148580577,	0	EZH2	cmpl	cmpl	2,1,1,0,0,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,
NM_004456.5	chr7	-	148504474	148581383	148504737	148544390	20	148504474,148506162,148506401,148507424,148508716,148511050,148512005,148512597,148513775,148514313,148514968,148516687,148523545,148524255,148525831,148526819,148529725,148543561,148544273,148581255,	148504798,148506247,148506482,148507506,148508812,148511229,148512131,148512638,148513870,148514483,148515209,148516779,148523724,148524358,148525972,148526940,148529842,148543690,148544397,148581383,	0	EZH2	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,0,-1,
NM_152998.3	chr7	-	148504474	148581383	148504737	148544390	19	148504474,148506162,148506401,148507424,148508716,148511050,148512005,148512597,148513775,148514313,148514968,148516687,148523560,148524255,148525831,148526819,148543561,148544273,148581255,	148504798,148506247,148506482,148507506,148508812,148511229,148512131,148512638,148513870,148514483,148515209,148516779,148523724,148524358,148525972,148526940,148543690,148544397,148581383,	0	EZH2	cmpl	cmpl	2,1,1,0,0,1,1,2,0,1,0,1,2,1,1,0,0,0,-1,
NM_001101.5	chr7	-	5566778	5570232	5567378	5569288	6	5566778,5567634,5567911,5568791,5569165,5570154,	5567522,5567816,5568350,5569031,5569294,5570232,	0	ACTB	cmpl	cmpl	0,1,0,0,0,-1,
NM_004016.3	chrX	-	31137338	31285071	31139949	31284946	17	31137338,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31284926,	31140047,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31285071,	0	DMD	cmpl	cmpl	1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,0,
NM_004018.3	chrX	-	31137338	31285071	31139949	31284946	16	31137338,31152218,31164407,31165391,31187559,31190464,31191655,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31284926,	31140047,31152311,31164531,31165635,31187718,31190530,31191721,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31285071,	0	DMD	cmpl	cmpl	1,1,0,2,2,2,2,0,2,0,1,2,1,1,2,0,
NM_004021.3	chrX	-	31137338	32173586	31139949	31792238	35	31137338,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32173487,	31140047,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32173586,	0	DMD	cmpl	cmpl	1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,0,-1,-1,-1,-1,-1,-1,-1,
NM_004023.3	chrX	-	31137338	32173586	31139949	31792238	31	31137338,31152218,31164407,31165391,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32173487,	31140047,31152311,31164531,31165635,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32173586,	0	DMD	cmpl	cmpl	1,1,0,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,0,-1,-1,-1,-1,-1,-1,-1,
NM_000109.4	chrX	-	31137338	33357505	31140035	33357382	79	31137338,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32235032,32305645,32328198,32360216,32361250,32364059,32366522,32380904,32382698,32383136,32398626,32404426,32407617,32408187,32429868,32456357,32459296,32466572,32472778,32481555,32482702,32486614,32490280,32503035,32509393,32519871,32536124,32563275,32583818,32591646,32591861,32613873,32632419,32662248,32663080,32715986,32717228,32827609,32834584,32841411,32862899,32867844,33038255,33357375,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32235180,32305818,32328393,32360399,32361403,32364197,32366645,32381075,32382827,32383316,32398797,32404582,32407791,32408298,32430030,32456507,32459431,32466755,32472949,32481711,32482816,32486827,32490426,32503216,32509635,32519959,32536248,32563451,32583998,32591754,32591963,32613993,32632570,32662430,32663269,32716115,32717410,32827728,32834757,32841504,32862977,32867937,33038317,33357505,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,2,0,0,0,1,2,0,0,0,0,1,0,
NM_004011.4	chrX	-	31137338	32430345	31140035	32430326	51	31137338,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32235032,32305645,32328198,32360216,32361250,32364059,32366522,32380904,32382698,32383136,32398626,32404426,32407617,32408187,32429868,32430278,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32235180,32305818,32328393,32360399,32361403,32364197,32366645,32381075,32382827,32383316,32398797,32404582,32407791,32408298,32430030,32430345,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,
NM_004012.4	chrX	-	31137338	32430345	31140035	32430174	51	31137338,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32235032,32305645,32328198,32360216,32361250,32364059,32366522,32380904,32382698,32383136,32398626,32404426,32407617,32408187,32429868,32430135,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32235180,32305818,32328393,32360399,32361403,32364197,32366645,32381075,32382827,32383316,32398797,32404582,32407791,32408298,32430030,32430345,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,
NM_004015.3	chrX	-	31137338	31285071	31140035	31284946	18	31137338,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31284926,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31285071,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,0,
NM_004017.3	chrX	-	31137338	31285071	31140035	31284946	17	31137338,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31284926,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31285071,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,0,2,0,1,2,1,1,2,0,
NM_004009.3	chrX	-	31137344	33146545	31140035	33146282	79	31137344,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32235032,32305645,32328198,32360216,32361250,32364059,32366522,32380904,32382698,32383136,32398626,32404426,32407617,32408187,32429868,32456357,32459296,32466572,32472778,32481555,32482702,32486614,32490280,32503035,32509393,32519871,32536124,32563275,32583818,32591646,32591861,32613873,32632419,32662248,32663080,32715986,32717228,32827609,32834584,32841411,32862899,32867844,33038255,33146263,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32235180,32305818,32328393,32360399,32361403,32364197,32366645,32381075,32382827,32383316,32398797,32404582,32407791,32408298,32430030,32456507,32459431,32466755,32472949,32481711,32482816,32486827,32490426,32503216,32509635,32519959,32536248,32563451,32583998,32591754,32591963,32613993,32632570,32662430,32663269,32716115,32717410,32827728,32834757,32841504,32862977,32867937,33038317,33146545,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,2,0,0,0,1,2,0,0,0,0,1,0,
NM_004010.3	chrX	-	31137344	33146544	31140035	32834745	79	31137344,31144758,31152218,31164407,31165391,31187559,31190464,31191655,31196048,31196785,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31341714,31366672,31462597,31496222,31497099,31514904,31525397,31645789,31676106,31697491,31747747,31792076,31838091,31854834,31893304,31947712,31950196,31986455,32235032,32305645,32328198,32360216,32361250,32364059,32366522,32380904,32382698,32383136,32398626,32404426,32407617,32408187,32429868,32456357,32459296,32466572,32472778,32481555,32482702,32486614,32490280,32503035,32509393,32519871,32536124,32563275,32583818,32591646,32591861,32613873,32632419,32662248,32663080,32715986,32717228,32827609,32834584,32841411,32862899,32867844,33038255,33146179,	31140047,31144790,31152311,31164531,31165635,31187718,31190530,31191721,31196087,31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31341775,31366751,31462744,31496491,31497220,31515061,31525570,31645979,31676261,31697703,31747865,31792309,31838200,31854936,31893490,31947862,31950344,31986631,32235180,32305818,32328393,32360399,32361403,32364197,32366645,32381075,32382827,32383316,32398797,32404582,32407791,32408298,32430030,32456507,32459431,32466755,32472949,32481711,32482816,32486827,32490426,32503216,32509635,32519959,32536248,32563451,32583998,32591754,32591963,32613993,32632570,32662430,32663269,32716115,32717410,32827728,32834757,32841504,32862977,32867937,33038317,33146544,	0	DMD	cmpl	cmpl	0,1,1,0,2,2,2,2,2,0,2,0,1,2,1,1,2,1,0,0,1,0,2,0,2,0,1,0,1,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,2,0,0,0,0,0,2,0,0,0,1,2,0,-1,-1,-1,-1,-1,
NM_004019.3	chrX	-	31196311	31285071	31196781	31284946	9	31196311,31198486,31200854,31222077,31224698,31227614,31241163,31279071,31284926,	31196922,31198598,31201021,31222235,31224784,31227816,31241238,31279133,31285071,	0	DMD	cmpl	cmpl	0,2,0,1,2,1,1,2,0,
NM_003140.3	chrY	-	2654895	2655723	2655029	2655644	1	2654895,	2655723,	0	SRY	cmpl	cmpl	0,