assembly-theory 0.6.1

# This is a modified version of what was generated by maturin v1.8.2 with:
#
#    maturin generate-ci github --platform linux macos --pytest
#
# When updating, carefully merge changes between the output of this command and
# the current file!
name: Python

on:
  push:
    branches:
      - main
      - master
    tags:
      - 'v[0-9]+.[0-9]+.[0-9]+' # jobs only run on semver tags.
  pull_request:
  workflow_dispatch:

permissions:
  contents: read

jobs:
  linux-native:
    name: linux-native (${{ matrix.platform.target }})
    runs-on: ${{ matrix.platform.runner }}
    strategy:
      matrix:
        platform:
          - runner: ubuntu-22.04
            target: x86_64
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: 3.x
      - name: Build wheels
        uses: PyO3/maturin-action@v1
        with:
          target: ${{ matrix.platform.target }}
          manylinux: manylinux_2_28
          before-script-linux: dnf install -y clang-devel gcc-x86_64-linux-gnu
          command: build
          args: --release --out dist --find-interpreter
          sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
      - name: Upload wheels
        uses: actions/upload-artifact@v4
        with:
          name: wheels-linux-${{ matrix.platform.target }}
          path: dist
      - name: pytest
        if: ${{ matrix.platform.target == 'x86_64' }}
        shell: bash
        run: |
          set -e
          python3 -m venv .venv
          source .venv/bin/activate
          pip install assembly-theory --no-index --find-links dist --force-reinstall
          pip install pytest
          pytest

  linux-cross:
    name: linux-cross (${{ matrix.platform.target }})
    runs-on: ${{ matrix.platform.runner }}
    strategy:
      matrix:
        platform:
          - runner: ubuntu-22.04
            target: aarch64
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: 3.x
      - name: Build wheels
        uses: PyO3/maturin-action@v1
        with:
          target: ${{ matrix.platform.target }}
          before-script-linux: apt-get update && apt-get install -y clang gcc-aarch64-linux-gnu
          command: build
          args: --release --out dist --find-interpreter
          sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
          manylinux: manylinux_2_28
      - name: Upload wheels
        uses: actions/upload-artifact@v4
        with:
          name: wheels-linux-${{ matrix.platform.target }}
          path: dist
      - name: pytest
        uses: uraimo/run-on-arch-action@v2
        with:
          arch: ${{ matrix.platform.target }}
          distro: ubuntu22.04
          githubToken: ${{ github.token }}
          install: |
            apt-get update
            apt-get install -y --no-install-recommends python3 python3-pip
            pip3 install -U pip pytest
          run: |
            set -e
            pip3 install assembly-theory --no-index --find-links dist --force-reinstall
            pytest

  macos:
    runs-on: ${{ matrix.platform.runner }}
    strategy:
      matrix:
        platform:
          - runner: macos-14
            target: aarch64
          - runner: macos-latest
            target: aarch64
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: 3.x
      - name: Install LLVM
        run: |
          brew install llvm
          echo "PATH=$(brew --prefix llvm)/bin:$PATH" >> $GITHUB_ENV
      - name: Build wheels
        uses: PyO3/maturin-action@v1
        with:
          target: ${{ matrix.platform.target }}
          args: --release --out dist --find-interpreter
          sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
      - name: Upload wheels
        uses: actions/upload-artifact@v4
        with:
          name: wheels-${{ matrix.platform.runner }}-${{ matrix.platform.target }}
          path: dist
      - name: pytest
        run: |
          set -e
          python3 -m venv .venv
          source .venv/bin/activate
          pip install assembly-theory --no-index --find-links dist --force-reinstall
          pip install pytest
          pytest

  sdist:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - name: Build sdist
        uses: PyO3/maturin-action@v1
        with:
          command: sdist
          args: --out dist
      - name: Upload sdist
        uses: actions/upload-artifact@v4
        with:
          name: wheels-sdist
          path: dist

  release:
    name: Release
    runs-on: ubuntu-latest
    if: ${{ startsWith(github.ref, 'refs/tags/') || github.event_name == 'workflow_dispatch' }}
    needs: [linux-native, linux-cross, macos, sdist]
    permissions:
      id-token: write
      contents: write
      attestations: write
    steps:
      - uses: actions/download-artifact@v4
      - name: Generate artifact attestation
        uses: actions/attest-build-provenance@v1
        with:
          subject-path: 'wheels-*/*'
      - name: Publish to PyPI
        if: ${{ startsWith(github.ref, 'refs/tags/') }}
        uses: PyO3/maturin-action@v1
        with:
          command: upload
          args: --non-interactive --skip-existing wheels-*/*