archivelib 0.2.0

An implementaton of the Greenleaf ArchiveLib compression/decompression algorithm
Documentation
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import ast
import functools
import json
import multiprocessing
import os
import pathlib
import pickle
import re
import shlex
import statistics
import subprocess
import sys
import tempfile
import typing as typ

HEX_MACRO_RE = re.compile(r'hex!\([\s\n]*"([\s\n0-9A-Fa-f]+)"[\s\n]*\)', re.MULTILINE)
U8_ARRAY_RE = re.compile(
    r"\[((?:(?:[1-9][0-9]*|0x[0-9A-F]{1,2}|0)(?:_?u8)?,?[\s\n]*)+)\]",
    re.MULTILINE | re.IGNORECASE,
)
U8_REPEAT_RE = re.compile(
    r"\[([1-9][0-9]*|0x[0-9A-F]{1,2}|0)(?:_?u8); ([1-9][0-9]*|0x[0-9A-F]{1,2}|0)\]",
    re.MULTILINE,
)
ROOT = pathlib.Path(__file__).resolve().parent

CRASH_STATUS_CODES = {
    101: "Rust Panic",
    134: "C Abort",
    -6: "C Abort",
    # 999: "Python Timeout",
}

KCOV_COMMON_OPTS = []


def kcov_report(dir):
    return []
    # return ["kcov", *KCOV_OPTS, "--report-only", dir]


def kcov_collect(dir):
    # return []
    return ["valgrind", "--leak-check=no", "--redzone-size=64"]
    # return ["kcov", *KCOV_OPTS, "--collect-only", dir]


PICKLED_INPUTS = ROOT / "data.pickle"
UNZIP_EXEC_NEW = ROOT / "target/debug/unalzip"
UNZIP_EXEC_SYS = ROOT / "target/debug/unalszip"
ZIP_EXEC_NEW = ROOT / "target/debug/alzip"
ZIP_EXEC_SYS = ROOT / "target/debug/alszip"

TEST_OUTPUT_ROOT_DIR = ROOT / "gen_test_cases"
TEST_OUTPUT_DIRS = {
    name: TEST_OUTPUT_ROOT_DIR / name
    for name in [
        "crash",
        "difference_err",
        "difference_out",
        "match_crash",
        "match_err",
        "match",
        "should_succeed",
        "timeout",
        "unknown",
        "wip",
    ]
}

ERROR_MAPPING = {
    rb'Error: "BinaryTreeError(Type1)"': "BTE1",
    rb'Error: "Binary tree error: Type1"': "BTE1",
    rb'Error: "Internal error: -101\u{0}"': "BTE1",
    rb'Error: "Internal 1 error in Greenleaf Decompression routine\u{0}"': "BTE1",
    rb'Error: "BinaryTreeError(Type2)"': "BTE2",
    rb'Error: "Binary tree error: Type2"': "BTE2",
    rb'Error: "Internal error: -102\u{0}"': "BTE2",
    rb'Error: "Internal 2 error in Greenleaf Decompression routine\u{0}"': "BTE2",
    rb'Error: "IOError: failed to write whole buffer"': "OOM",
    rb'Error: "Attempt to allocate a huge buffer of 65536 bytes for ALMemory decompress\u{0}"': "OOM",
    rb'Error: "Attempt to allocate a huge buffer of 65536 bytes for ALMemory\u{0}"': "OOM",
    rb'Error: "InvariantFailure"': "INV",
    rb'Error: "Invariant Failure"': "INV",
}


def sp_run(cmd, **opts):
    cmd = [str(i) for i in cmd]
    # print(f"Running: {' '.join(map(shlex.quote, cmd))}")
    return subprocess.run(cmd, **opts)


def get_all_inputs() -> typ.Set[bytes]:
    inputs = frozenset()
    try:
        with PICKLED_INPUTS.open("rb") as f:
            inputs = inputs | inputs.union(pickle.load(f))
    except:
        pass
    for folder in ["_known_inputs", "fuzz/known_inputs", "fuzz/corpus"]:
        if (ROOT / folder).is_dir():
            inputs = inputs | get_inputs_in_folder(ROOT / folder)
    for folder in ROOT.iterdir():
        if folder.name.endswith("_corpus"):
            inputs = inputs | get_inputs_in_folder(folder)
    for folder in (ROOT / "tests/data/").iterdir():
        if folder.is_dir():
            inputs = inputs | get_inputs_in_folder(folder)
    for folder in (ROOT / "fuzz").iterdir():
        if "afl_out" in folder.name:
            for f in ["hangs", "crashes"]:
                if (folder / f).is_dir():
                    inputs = inputs | get_inputs_in_folder(folder / f)
    for folder in ["tests", "src", "old_tests", "archivelib-sys-refactored/src"]:
        inputs = inputs | get_test_case_inputs(ROOT / folder)
    inputs = {i for i in inputs if i is not None}
    with PICKLED_INPUTS.open("wb") as f:
        pickle.dump(inputs, f, protocol=pickle.HIGHEST_PROTOCOL)
    return inputs


def get_inputs_in_folder(folder) -> typ.Set[bytes]:
    return {
        f.read_bytes()
        for f in pathlib.Path(folder).iterdir()
        if f.is_file() and f.name != "README.txt"
    }


def get_test_case_inputs(folder=ROOT / "tests") -> typ.Set[bytes]:
    inputs = set()
    for file in folder.iterdir():
        if file.is_dir():
            inputs = inputs | get_test_case_inputs(file)
        elif file.is_file() and file.name.endswith(".rs"):
            file_text = file.read_text()
            for match in HEX_MACRO_RE.finditer(file_text):
                inputs.add(bytes.fromhex(match.group(1).replace("\n", "")))
            for match in U8_ARRAY_RE.finditer(file_text):
                l = ast.literal_eval(match.group(0).replace("_u8", "").replace("_", ""))
                if all(i <= 255 for i in l):
                    inputs.add(bytes(l))
            for match in U8_REPEAT_RE.finditer(file_text):
                v = int(match.group(1))
                if v <= 255:
                    inputs.add(bytes([v]) * int(match.group(2)))
    return inputs


def run_exec(input, kcov_base, exec, level="4"):
    try:
        result = sp_run(
            [*kcov_collect(kcov_base), exec, f"-{level}"],
            input=input,
            stdout=subprocess.PIPE,
            stderr=subprocess.PIPE,
            timeout=60,
        )
        rc = result.returncode
        out = result.stdout
        err = result.stderr.strip()
    except subprocess.TimeoutExpired as e:
        rc = 999
        out = e.stdout
        err = e.stderr.strip()

    if not err or rc == 0:
        match_err = err
        known_err = True
    else:
        match_err = err
        known_err = None
        if b"Invalid write of size" in err:
            # Invariant error from Valgrind because we are writing out of bounds
            known_err = "INV"
            match_err = "Valgrind"
        else:
            for line in err.splitlines():
                e = re.sub(rb'".*? \(0x[0-9a-f]{4,}\) ', b'"', line.strip())
                if e in ERROR_MAPPING:
                    known_err = ERROR_MAPPING[e]
                    match_err = e
                    break
    return (rc, out, err, match_err, known_err)


def test_case_name(input):
    import hashlib

    sha = hashlib.sha1(input).hexdigest()
    size = len(input) if len(input) < 100_000 else 99999
    return f"{size:05}~{sha}"


def bytes_to_test_hex(data):
    aparts = []
    bparts = []
    out = ""
    for b in data:
        aparts.append(f"{b:02X}")
        if len(aparts) >= 8:
            bparts.append(" ".join(aparts))
            aparts = []
        if len(bparts) >= 4:
            out += f'{"  ".join(bparts)}\n'
            bparts = []
    if aparts:
        bparts.append(" ".join(aparts))
    if bparts:
        out += f'{"  ".join(bparts)}\n'
    return out


def bytes_to_rust_array(data):
    aparts = []
    out = ""
    for b in data:
        aparts.append(f"0x{b:02X},")
        if len(aparts) >= 16:
            out += f'{" ".join(aparts)}\n'
            aparts = []
    if aparts:
        out += f'{" ".join(aparts)}\n'
    return f"[\n{out}]\n"


def output_test_case(
    input,
    *,
    sys_out=None,
    new_out=None,
    sys_err=None,
    new_err=None,
    sys_cov=None,
    new_cov=None,
    fail_type,
):
    name = test_case_name(input)
    if fail_type not in TEST_OUTPUT_DIRS:
        print(f"You forgot a fail_type({fail_type!r}). I got you fam")
        TEST_OUTPUT_DIRS[fail_type] = TEST_OUTPUT_ROOT_DIR / fail_type
    out = TEST_OUTPUT_DIRS[fail_type] / name
    sp_run(["rm", "-rf", out], check=True)
    out.mkdir(parents=True)
    (out / "input.dat").write_bytes(input)
    (out / "input.txt").write_text(bytes_to_test_hex(input))
    (out / "input.rs").write_text(bytes_to_rust_array(input))
    for (o, name) in [(sys_out, "sys_"), (new_out, "new_")]:
        if o is not None:
            (out / f"{name}output.dat").write_bytes(o)
            (out / f"{name}output.txt").write_text(bytes_to_test_hex(o))
            (out / f"{name}output.rs").write_text(bytes_to_rust_array(o))
    for (o, name) in [(sys_err, "sys_"), (new_err, "new_")]:
        if o is not None:
            (out / f"{name}err.txt").write_bytes(o)

    for (orig, exec, target) in [
        (sys_cov, UNZIP_EXEC_SYS, "sys"),
        (new_cov, UNZIP_EXEC_NEW, "new"),
    ]:
        if orig is not None:
            kcov_out = out / target
            kcov_call = kcov_report(orig)
            if kcov_call:
                sp_run([*kcov_call, exec], check=True)
                sp_run(["cp", "-r", orig, kcov_out], check=True)
    # print(f"{sha1}: {len(input)} byte(s); {fail_type}")


def run(input: bytes):
    name = test_case_name(input)
    to_rm = {k: o / name for k, o in TEST_OUTPUT_DIRS.items()}
    for k in ["match"]:
        if to_rm[k].is_dir():
            # print(f"{sha1}: {len(input)} byte(s); Existing match")
            return {
                "name": name,
                # "input": input,
                "len": len(input),
                # "input_rs": ", ".join(f"0x{i:02X}" for i in input),
                # "input_16": " ".join(f"{i:02X}" for i in input),
                "fail_type": k,
                "sys": {"ok": True, "err": "", "code": True},
                "new": {"ok": True, "err": "", "code": True},
            }
    base = TEST_OUTPUT_DIRS["wip"] / name
    sp_run(["rm", "-rf", *to_rm.values()], check=True)
    sys_base = base / "sys"
    new_base = base / "new"
    sys_base.mkdir(parents=True)
    new_base.mkdir(parents=True)
    (base / "input.dat").write_bytes(input)

    (sys_rc, sys_out, sys_err, sys_err_msg, sys_known_err) = run_exec(
        input, sys_base, UNZIP_EXEC_SYS
    )
    (new_rc, new_out, new_err, new_err_msg, new_known_err) = run_exec(
        input, new_base, UNZIP_EXEC_NEW
    )
    if not sys_known_err:
        print(name, "Unknown sys error: ", sys_err)
    if not new_known_err:
        print(name, "Unknown new error: ", new_err)

    if new_rc == 999:
        fail_type = "timeout"
    elif sys_rc == 0:
        if new_rc != 0:
            fail_type = "should_succeed"
        elif sys_out != new_out:
            fail_type = "difference_out"
        else:
            fail_type = "match"
    elif sys_known_err:
        if new_known_err == sys_known_err:
            fail_type = "match_err"
        else:
            fail_type = "difference_err"
    elif new_known_err == "INV" and sys_rc in CRASH_STATUS_CODES:
        fail_type = "match_crash"
    elif {sys_rc, new_rc} & set(CRASH_STATUS_CODES):
        # Rust crash, Segfault/Abort, Timeout.
        fail_type = "crash"
    else:
        fail_type = "unknown"
        print("Unknown data: ", len(input), name)
        print(
            " sys:",
            (
                sys_rc,
                CRASH_STATUS_CODES.get(sys_rc, "Non-crash"),
                len(sys_out),
                sys_err,
                sys_known_err,
            ),
        )
        print(
            " new:",
            (
                new_rc,
                CRASH_STATUS_CODES.get(new_rc, "Non-crash"),
                len(new_out),
                new_err,
                new_known_err,
            ),
        )
    output_test_case(
        input,
        sys_out=sys_out,
        sys_err=sys_err,
        sys_cov=sys_base,
        new_out=new_out,
        new_err=new_err,
        new_cov=new_base,
        fail_type=fail_type,
    )
    sp_run(["rm", "-rf", base])
    return {
        "name": name,
        # "input": input,
        "len": len(input),
        # "input_rs": ", ".join(f"0x{i:02X}" for i in input),
        # "input_16": " ".join(f"{i:02X}" for i in input),
        "fail_type": fail_type,
        "sys": {"ok": sys_rc == 0, "err": str(sys_err_msg), "code": sys_known_err},
        "new": {"ok": new_rc == 0, "err": str(new_err_msg), "code": new_known_err},
    }


def tmin_test_case(cout, tmin_out, item):
    if not item or len(item) > (2 ** 14):
        # tmin doesn't like the empty file
        return b""
    with tempfile.NamedTemporaryFile("rb") as tout:
        sp_run(
            [
                "cargo",
                "afl",
                "tmin",
                "-i",
                out,
                "-o",
                tout.name,
                "-t5000",
                "-m250",
                "--",
                "target/debug/alfuzz_afl",
            ]
        )
        tmin_data = pathlib.Path(tout.name).read_bytes()
    (tmin_out / test_case_name(tmin_data)).write_bytes(tmin_data)
    return tmin_data


def minimise_test_case_corpus(tmin_out):
    cmin_out = ROOT / "_cmin_corpus"
    cmin_edge_out = ROOT / "_cmin_edge_corpus"
    sp_run(["rm", "-rf", cmin_out, cmin_edge_out], check=True)

    sp_run(
        [
            "cargo",
            "afl",
            "cmin",
            "-i",
            tmin_out,
            "-o",
            cmin_out,
            "-t5000",
            "-m250",
            "--",
            "target/debug/alfuzz_afl",
        ]
    )
    sp_run(
        [
            "cargo",
            "afl",
            "cmin",
            "-i",
            tmin_out,
            "-o",
            cmin_edge_out,
            "-e",
            "-t5000",
            "-m250",
            "--",
            "target/debug/alfuzz_afl",
        ]
    )
    return (cmin_out, cmin_edge_out)


def main():
    data = sorted(get_all_inputs(), key=len, reverse=True)
    lens = list(map(len, data))
    print(f"Total test cases: {len(data)}")
    print(f"Average length: {statistics.mean(lens):0.1f}")
    print(f"Median length:  {statistics.median(lens):0.1f}")

    sp_run(["cargo", "build", "--all", "--bins"], check=True, cwd=ROOT)
    # sp_run(
    #     ["cargo", "afl", "build", "--features=fuzz-afl"], check=True, cwd=(ROOT / "cli")
    # )
    cout = ROOT / "_corpus"
    tmin_out = ROOT / "_tmin_corpus"
    sp_run(["rm", "-rf", tmin_out], check=True)
    tmin_out.mkdir(exist_ok=True)
    cout.mkdir(exist_ok=True)

    test_cases = {}
    changed_data = data
    with multiprocessing.Pool(16) as p:
        while changed_data:
            for item in changed_data:
                out = cout / test_case_name(item)
                out.write_bytes(item)
            # case_min = p.apply_async(minimise_test_case_corpus, args=(cout,))
            for out in p.imap_unordered(
                run, filter(lambda item: len(item) < 10, changed_data)
            ):
                key = (
                    out["fail_type"],
                    out["sys"]["code"] or out["sys"]["err"],
                    out["new"]["code"] or out["new"]["err"],
                )
                test_cases.setdefault(key, []).append(out)
            # (a_dir, b_dir) = case_min.get()
            # minimal_cases = {
            #     file.read_bytes()
            #     for folder in [a_dir, b_dir]
            #     for file in folder.iterdir()
            # }
            # p.map(functools.partial(tmin_test_case, cout, tmin_out), data)

            old_data = set(data)
            new_data = get_all_inputs()
            changed_data = new_data - old_data

    data = []
    for key, cases in test_cases.items():
        cases.sort(key=lambda k: (k["len"], k["name"]))
        data.append(
            {"key": dict(zip(["fail_type", "sys", "new"], key)), "cases": cases}
        )
    with (TEST_OUTPUT_ROOT_DIR / "interesting.json").open("w") as f:
        json.dump(data, f, sort_keys=True, default=repr, indent=2)


if __name__ == "__main__":
    main()