alopex-core 0.7.3

Core storage engine for Alopex DB - LSM-tree, columnar storage, and vector index
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
//! Generic external-sort spill primitives.

use std::cmp::Ordering;
use std::collections::BinaryHeap;
use std::fs::{self, File, OpenOptions};
use std::io::{BufReader, BufWriter, Read, Write};
use std::path::{Path, PathBuf};
use std::sync::atomic::{AtomicU64, Ordering as AtomicOrdering};
use std::sync::Arc;

use crate::sql::stream::MemoryPolicy;
use crate::{Error, Result};

type KeyDecoder<K> = dyn Fn(&[u8]) -> Result<K>;
type RowDecoder<T> = dyn Fn(u64, &[u8]) -> Result<T>;
type KeyComparator<K> = dyn Fn(&K, &K) -> Ordering;
type RowId<T> = dyn Fn(&T) -> u64;

static SPILL_COUNTER: AtomicU64 = AtomicU64::new(0);

/// Write one sorted spill run to disk and clear the in-memory entries.
pub fn spill_run<T, K, C, R, EK, ER>(
    entries: &mut Vec<(T, K)>,
    policy: &MemoryPolicy,
    prefix: &str,
    mut compare_keys: C,
    row_id: R,
    encode_key: EK,
    encode_row: ER,
) -> Result<PathBuf>
where
    C: FnMut(&K, &K) -> Ordering,
    R: Fn(&T) -> u64,
    EK: Fn(&K) -> Vec<u8>,
    ER: Fn(&T) -> Vec<u8>,
{
    let directory = policy.spill_directory().ok_or_else(|| Error::SpillFailed {
        reason: "sort spill: spill directory not configured".into(),
    })?;
    ensure_spill_dir(directory)?;
    let (path, file) = create_spill_file(directory, prefix)?;
    let mut writer = BufWriter::new(file);

    entries.sort_by(|a, b| compare_keys(&a.1, &b.1));

    let mut bytes_written = 0u64;
    for (row, keys) in entries.iter() {
        let key_bytes = encode_key(keys);
        let row_bytes = encode_row(row);
        let key_len = u32::try_from(key_bytes.len()).map_err(|_| Error::SpillFailed {
            reason: "sort spill: sort key size exceeds u32::MAX".into(),
        })?;
        let row_len = u32::try_from(row_bytes.len()).map_err(|_| Error::SpillFailed {
            reason: "sort spill: row size exceeds u32::MAX".into(),
        })?;

        writer
            .write_all(&row_id(row).to_le_bytes())
            .map_err(|err| spill_io_error("sort spill", err))?;
        writer
            .write_all(&key_len.to_le_bytes())
            .map_err(|err| spill_io_error("sort spill", err))?;
        writer
            .write_all(&row_len.to_le_bytes())
            .map_err(|err| spill_io_error("sort spill", err))?;
        writer
            .write_all(&key_bytes)
            .map_err(|err| spill_io_error("sort spill", err))?;
        writer
            .write_all(&row_bytes)
            .map_err(|err| spill_io_error("sort spill", err))?;
        bytes_written = bytes_written
            .saturating_add(8)
            .saturating_add(4)
            .saturating_add(4)
            .saturating_add(key_bytes.len() as u64)
            .saturating_add(row_bytes.len() as u64);
    }

    writer
        .flush()
        .map_err(|err| spill_io_error("sort spill", err))?;
    policy.record_spill(bytes_written, 1);
    entries.clear();

    Ok(path)
}

/// Ensure the spill directory exists.
pub fn ensure_spill_dir(directory: &Path) -> Result<()> {
    fs::create_dir_all(directory).map_err(|err| spill_io_error("sort spill", err))?;
    Ok(())
}

/// Create a unique spill file in `directory` using `prefix`.
pub fn create_spill_file(directory: &Path, prefix: &str) -> Result<(PathBuf, File)> {
    for _ in 0..16 {
        let counter = SPILL_COUNTER.fetch_add(1, AtomicOrdering::Relaxed);
        let timestamp = std::time::SystemTime::now()
            .duration_since(std::time::UNIX_EPOCH)
            .unwrap_or_default()
            .as_nanos();
        let path = directory.join(format!("{prefix}-{timestamp}-{counter}.bin"));
        match OpenOptions::new().create_new(true).write(true).open(&path) {
            Ok(file) => return Ok((path, file)),
            Err(err) if err.kind() == std::io::ErrorKind::AlreadyExists => continue,
            Err(err) => return Err(spill_io_error("sort spill", err)),
        }
    }
    Err(Error::SpillFailed {
        reason: "sort spill: failed to allocate spill file".into(),
    })
}

/// Convert a spill I/O failure into the stable core spill error variant.
pub fn spill_io_error(operation: &str, err: impl std::fmt::Display) -> Error {
    Error::SpillFailed {
        reason: format!("{operation}: {err}"),
    }
}

/// One decoded entry from a spill run.
pub struct SpillEntry<T, K> {
    /// Decoded row payload.
    pub row: T,
    /// Decoded sort key payload.
    pub keys: K,
}

/// Reader for one spill run file.
pub struct SpillRunReader<T, K> {
    path: PathBuf,
    reader: BufReader<File>,
    decode_key: Arc<KeyDecoder<K>>,
    decode_row: Arc<RowDecoder<T>>,
}

impl<T, K> SpillRunReader<T, K> {
    /// Open a spill run and configure decoders for key and row payloads.
    pub fn open<DK, DR>(path: PathBuf, decode_key: DK, decode_row: DR) -> Result<Self>
    where
        DK: Fn(&[u8]) -> Result<K> + 'static,
        DR: Fn(u64, &[u8]) -> Result<T> + 'static,
    {
        Self::open_with_decoders(path, Arc::new(decode_key), Arc::new(decode_row))
    }

    fn open_with_decoders(
        path: PathBuf,
        decode_key: Arc<KeyDecoder<K>>,
        decode_row: Arc<RowDecoder<T>>,
    ) -> Result<Self> {
        let file = File::open(&path).map_err(|err| spill_io_error("sort spill", err))?;
        Ok(Self {
            path,
            reader: BufReader::new(file),
            decode_key,
            decode_row,
        })
    }

    /// Read the next spill entry, or `None` at end of run.
    pub fn next_entry(&mut self) -> Result<Option<SpillEntry<T, K>>> {
        let mut row_id_buf = [0u8; 8];
        match self.reader.read_exact(&mut row_id_buf) {
            Ok(()) => {}
            Err(err) if err.kind() == std::io::ErrorKind::UnexpectedEof => return Ok(None),
            Err(err) => return Err(spill_io_error("sort spill", err)),
        }
        let row_id = u64::from_le_bytes(row_id_buf);
        let key_len = self.read_u32()?;
        let row_len = self.read_u32()?;

        let mut key_bytes = vec![0u8; key_len as usize];
        self.reader
            .read_exact(&mut key_bytes)
            .map_err(|err| spill_io_error("sort spill", err))?;
        let mut row_bytes = vec![0u8; row_len as usize];
        self.reader
            .read_exact(&mut row_bytes)
            .map_err(|err| spill_io_error("sort spill", err))?;

        let keys = (self.decode_key)(&key_bytes)?;
        let row = (self.decode_row)(row_id, &row_bytes)?;

        Ok(Some(SpillEntry { row, keys }))
    }

    fn read_u32(&mut self) -> Result<u32> {
        let mut buf = [0u8; 4];
        self.reader
            .read_exact(&mut buf)
            .map_err(|err| spill_io_error("sort spill", err))?;
        Ok(u32::from_le_bytes(buf))
    }
}

impl<T, K> Drop for SpillRunReader<T, K> {
    fn drop(&mut self) {
        let _ = fs::remove_file(&self.path);
    }
}

/// K-way merge iterator over sorted spill run files.
pub struct SpillMergeIterator<T, K> {
    compare: Arc<KeyComparator<K>>,
    row_id: Arc<RowId<T>>,
    readers: Vec<SpillRunReader<T, K>>,
    heap: BinaryHeap<SpillHeapItem<T, K>>,
}

impl<T, K> SpillMergeIterator<T, K> {
    /// Open spill runs and initialize the merge heap.
    pub fn new<C, R, DK, DR>(
        runs: Vec<PathBuf>,
        compare_keys: C,
        row_id: R,
        decode_key: DK,
        decode_row: DR,
    ) -> Result<Self>
    where
        C: Fn(&K, &K) -> Ordering + 'static,
        R: Fn(&T) -> u64 + 'static,
        DK: Fn(&[u8]) -> Result<K> + 'static,
        DR: Fn(u64, &[u8]) -> Result<T> + 'static,
    {
        let compare: Arc<KeyComparator<K>> = Arc::new(compare_keys);
        let row_id: Arc<RowId<T>> = Arc::new(row_id);
        let decode_key: Arc<KeyDecoder<K>> = Arc::new(decode_key);
        let decode_row: Arc<RowDecoder<T>> = Arc::new(decode_row);
        let mut readers = Vec::with_capacity(runs.len());
        let mut heap = BinaryHeap::new();

        for (idx, path) in runs.into_iter().enumerate() {
            let mut reader = SpillRunReader::open_with_decoders(
                path,
                Arc::clone(&decode_key),
                Arc::clone(&decode_row),
            )?;
            if let Some(entry) = reader.next_entry()? {
                heap.push(SpillHeapItem {
                    run_idx: idx,
                    row: entry.row,
                    keys: entry.keys,
                    compare: Arc::clone(&compare),
                    row_id: Arc::clone(&row_id),
                });
            }
            readers.push(reader);
        }

        Ok(Self {
            compare,
            row_id,
            readers,
            heap,
        })
    }

    /// Return the next globally sorted row from the spill runs.
    pub fn next_item(&mut self) -> Option<Result<T>> {
        let item = self.heap.pop()?;
        let row = item.row;
        let run_idx = item.run_idx;

        match self.readers[run_idx].next_entry() {
            Ok(Some(entry)) => {
                self.heap.push(SpillHeapItem {
                    run_idx,
                    row: entry.row,
                    keys: entry.keys,
                    compare: Arc::clone(&self.compare),
                    row_id: Arc::clone(&self.row_id),
                });
            }
            Ok(None) => {}
            Err(err) => return Some(Err(err)),
        }

        Some(Ok(row))
    }
}

impl<T, K> Iterator for SpillMergeIterator<T, K> {
    type Item = Result<T>;

    fn next(&mut self) -> Option<Self::Item> {
        self.next_item()
    }
}

struct SpillHeapItem<T, K> {
    run_idx: usize,
    row: T,
    keys: K,
    compare: Arc<KeyComparator<K>>,
    row_id: Arc<RowId<T>>,
}

impl<T, K> PartialEq for SpillHeapItem<T, K> {
    fn eq(&self, other: &Self) -> bool {
        (self.compare)(&self.keys, &other.keys) == Ordering::Equal
            && self.run_idx == other.run_idx
            && (self.row_id)(&self.row) == (self.row_id)(&other.row)
    }
}

impl<T, K> Eq for SpillHeapItem<T, K> {}

impl<T, K> PartialOrd for SpillHeapItem<T, K> {
    fn partial_cmp(&self, other: &Self) -> Option<Ordering> {
        Some(self.cmp(other))
    }
}

impl<T, K> Ord for SpillHeapItem<T, K> {
    fn cmp(&self, other: &Self) -> Ordering {
        let order = (self.compare)(&self.keys, &other.keys);
        let order = if order == Ordering::Equal {
            self.run_idx
                .cmp(&other.run_idx)
                .then_with(|| (self.row_id)(&self.row).cmp(&(self.row_id)(&other.row)))
        } else {
            order
        };
        order.reverse()
    }
}

#[cfg(all(test, not(target_arch = "wasm32")))]
mod tests {
    use super::{spill_io_error, spill_run, SpillMergeIterator, SpillRunReader};
    use crate::sql::stream::{MemoryPolicy, SpillPolicy};
    use crate::Error;

    #[derive(Debug, Clone, PartialEq, Eq)]
    struct TestRow {
        row_id: u64,
        value: i64,
    }

    fn encode_i64(value: &i64) -> Vec<u8> {
        value.to_le_bytes().to_vec()
    }

    fn decode_i64(bytes: &[u8]) -> crate::Result<i64> {
        let data: [u8; 8] = bytes.try_into().map_err(|_| Error::SpillFailed {
            reason: "invalid i64 bytes".into(),
        })?;
        Ok(i64::from_le_bytes(data))
    }

    fn encode_row(row: &TestRow) -> Vec<u8> {
        row.value.to_le_bytes().to_vec()
    }

    fn decode_row(row_id: u64, bytes: &[u8]) -> crate::Result<TestRow> {
        Ok(TestRow {
            row_id,
            value: decode_i64(bytes)?,
        })
    }

    #[test]
    fn spill_run_writes_and_reader_reads_entries_round_trip() {
        let dir = tempfile::tempdir().unwrap();
        let policy = MemoryPolicy::new(
            Some(1),
            SpillPolicy::SpillToDisk {
                directory: dir.path().to_path_buf(),
            },
        );
        let mut entries = vec![
            (
                TestRow {
                    row_id: 2,
                    value: 20,
                },
                20,
            ),
            (
                TestRow {
                    row_id: 1,
                    value: 10,
                },
                10,
            ),
        ];

        let path = spill_run(
            &mut entries,
            &policy,
            "test-run",
            |left, right| left.cmp(right),
            |row| row.row_id,
            encode_i64,
            encode_row,
        )
        .unwrap();

        assert!(entries.is_empty());
        let mut reader = SpillRunReader::open(path.clone(), decode_i64, decode_row).unwrap();
        assert_eq!(
            reader
                .next_entry()
                .unwrap()
                .map(|entry| (entry.row, entry.keys)),
            Some((
                TestRow {
                    row_id: 1,
                    value: 10
                },
                10
            ))
        );
        assert_eq!(
            reader
                .next_entry()
                .unwrap()
                .map(|entry| (entry.row, entry.keys)),
            Some((
                TestRow {
                    row_id: 2,
                    value: 20
                },
                20
            ))
        );
        assert!(reader.next_entry().unwrap().is_none());
        drop(reader);
        assert!(!path.exists());
    }

    #[test]
    fn spill_merge_iterator_outputs_k_way_sorted_order() {
        let dir = tempfile::tempdir().unwrap();
        let policy = MemoryPolicy::new(
            Some(1),
            SpillPolicy::SpillToDisk {
                directory: dir.path().to_path_buf(),
            },
        );
        let mut left = vec![
            (
                TestRow {
                    row_id: 3,
                    value: 30,
                },
                30,
            ),
            (
                TestRow {
                    row_id: 1,
                    value: 10,
                },
                10,
            ),
        ];
        let mut right = vec![
            (
                TestRow {
                    row_id: 4,
                    value: 40,
                },
                40,
            ),
            (
                TestRow {
                    row_id: 2,
                    value: 20,
                },
                20,
            ),
        ];
        let run_a = spill_run(
            &mut left,
            &policy,
            "test-run",
            |left, right| left.cmp(right),
            |row| row.row_id,
            encode_i64,
            encode_row,
        )
        .unwrap();
        let run_b = spill_run(
            &mut right,
            &policy,
            "test-run",
            |left, right| left.cmp(right),
            |row| row.row_id,
            encode_i64,
            encode_row,
        )
        .unwrap();

        let mut iter = SpillMergeIterator::new(
            vec![run_a, run_b],
            |left, right| left.cmp(right),
            |row: &TestRow| row.row_id,
            decode_i64,
            decode_row,
        )
        .unwrap();

        let mut values = Vec::new();
        while let Some(row) = iter.next_item() {
            values.push(row.unwrap().value);
        }

        assert_eq!(values, vec![10, 20, 30, 40]);
    }

    #[test]
    fn spill_failure_returns_stable_error_variant() {
        let err = spill_io_error("sort spill", std::io::Error::other("disk full"));

        assert!(matches!(err, Error::SpillFailed { .. }));
        assert!(err.to_string().contains("sort spill"));
        assert!(err.to_string().contains("disk full"));
    }
}