use num_traits::{Float, FromPrimitive};
pub struct Bonferroni {
num_elements: usize,
}
impl Bonferroni {
#[must_use]
pub fn new(num_elements: usize) -> Self {
Self { num_elements }
}
#[must_use]
pub fn adjust<T: Float + FromPrimitive>(&self, pvalue: T) -> T {
(pvalue * T::from_usize(self.num_elements).unwrap()).min(T::one())
}
#[must_use]
pub fn adjust_slice<T: Float + FromPrimitive>(slice: &[T]) -> Vec<T> {
let b = Self::new(slice.len());
slice.iter().map(|x| b.adjust(*x)).collect()
}
}
#[cfg(test)]
mod testing {
use super::Bonferroni;
#[test]
fn example() {
let pvalues = vec![0.1, 0.2, 0.3, 0.4];
let adj_pvalues = Bonferroni::adjust_slice(&pvalues);
assert_eq!(adj_pvalues, vec![0.4, 0.8, 1.0, 1.0]);
}
#[test]
fn example_null() {
let pvalues: Vec<f64> = vec![];
let adj_pvalues = Bonferroni::adjust_slice(&pvalues);
assert_eq!(adj_pvalues, vec![]);
}
#[test]
fn example_adjust() {
let b = Bonferroni::new(100);
let p = 0.001;
assert_eq!(b.adjust(p), 0.1);
}
}