Struct consprob::StaFeParams

source · [−]

pub struct StaFeParams<T> {
    pub ba_score_mat: SparseFreeEnergyMat<T>,
    pub bpa_score_mat: FreeEnergy4dMat<T>,
    pub insert_scores_range: FreeEnergyMat,
    pub insert_scores_range_4_el: FreeEnergyMat,
    pub insert_scores_range_4_ml: FreeEnergyMat,
    pub insert_scores_range_2: FreeEnergyMat,
    pub insert_scores_range_4_el_2: FreeEnergyMat,
    pub insert_scores_range_4_ml_2: FreeEnergyMat,
}

Fields

ba_score_mat: SparseFreeEnergyMat<T>bpa_score_mat: FreeEnergy4dMat<T>insert_scores_range: FreeEnergyMatinsert_scores_range_4_el: FreeEnergyMatinsert_scores_range_4_ml: FreeEnergyMatinsert_scores_range_2: FreeEnergyMatinsert_scores_range_4_el_2: FreeEnergyMatinsert_scores_range_4_ml_2: FreeEnergyMat

Implementations

impl<T: Hash + Eq + Integer + FromPrimitive + PrimInt + Unsigned> StaFeParams<T>

pub fn origin() -> StaFeParams<T>

pub fn new(
    seq_pair: &SeqPair<'_>,
    seq_len_pair: &PosPair<T>,
    pos_quadruple_mat: &PosQuadrupleMat<T>,
    align_prob_mat: &SparseProbMat<T>,
    uses_contra_model: bool
) -> StaFeParams<T>

Auto Trait Implementations

impl<T> RefUnwindSafe for StaFeParams<T> where
T: RefUnwindSafe,

impl<T> Send for StaFeParams<T> where
T: Send,

impl<T> Sync for StaFeParams<T> where
T: Sync,

impl<T> Unpin for StaFeParams<T> where
T: Unpin,

impl<T> UnwindSafe for StaFeParams<T> where
T: UnwindSafe,

Blanket Implementations

impl<T> Any for T where
T: 'static + ?Sized,

fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

impl<T> Borrow<T> for T where
T: ?Sized,

const: unstable · source

fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

impl<T> BorrowMut<T> for T where
T: ?Sized,

const: unstable · source

fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

impl<T> From<T> for T

const: unstable · source

fn from(t: T) -> T

Returns the argument unchanged.

impl<T, U> Into<U> for T where
U: From<T>,

const: unstable · source

fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

impl<T, U> TryFrom<U> for T where
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

const: unstable · source

fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.

const: unstable · source

fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.