Struct CfBuildResult

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pub struct CfBuildResult {
    pub seg_file: PathBuf,
    pub seq_file: PathBuf,
    pub json_file: PathBuf,
    pub vertex_count: u64,
    pub unitig_count: u64,
    pub max_unitig_len: usize,
    pub min_unitig_len: usize,
    pub sum_unitig_len: u64,
    pub short_seqs: Vec<(String, usize)>,
}

Expand description

Result of a successful cf_build invocation.

Fields§

§seg_file: PathBuf

Path to the segment file ({prefix}.cf_seg).

§seq_file: PathBuf

Path to the sequence/tiling file ({prefix}.cf_seq).

§json_file: PathBuf

Path to the JSON metadata file ({prefix}.json).

§vertex_count: u64

Number of distinct k-mers (vertices).

§unitig_count: u64

Number of maximal unitigs.

§max_unitig_len: usize

Length of the longest unitig (in bases).

§min_unitig_len: usize

Length of the shortest unitig (in bases).

§sum_unitig_len: u64

Sum of all unitig lengths (in bases).

§short_seqs: Vec<(String, usize)>

Input sequences shorter than k (name, length).

Auto Trait Implementations§

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impl UnwindSafe for CfBuildResult

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