Crate bustools_cli
source ·Expand description
Modules§
- Filtering/Merging busfiles on CB/UMI overlap
butterfly
provides quanification of amplification for a kallisto-bus scRNAseq experiment- concatenate busfiles
- Code for
bustools correct
to correct sequencing errors in Cell Barcodes using a whitelist - Recreating
bustools count
to aggregate a busfile into a count-matrix - This turns a busfolder into a count matrix, slightly different strategy than crate::count. Not sure which is fsater
- A sparse countmatrix: cells vs genes
- Inspecting a busfile for statistics
- Multinomial sampling of large/long probability vectors
bustools sort
code. Sorts busfiles by CB/UMI/EC