Struct block_aligner::scan_block::Trace

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pub struct Trace { /* private fields */ }

Expand description

Holds the trace generated by block aligner.

Implementations

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impl Trace

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pub fn cigar(&self, i: usize, j: usize, cigar: &mut Cigar)

Create a CIGAR string that represents a single traceback path ending on the specified location.

When aligning q against r, this represents the edits to go from r to q.

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pub fn blocks(&self) -> Vec<Rectangle>

Return all of the rectangular regions that were calculated separately as block aligner shifts and grows.

Trait Implementations

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impl Clone for Trace

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fn clone(&self) -> Trace

Returns a copy of the value. Read more

1.0.0 · source

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

Auto Trait Implementations

impl RefUnwindSafe for Trace

impl Send for Trace

impl Sync for Trace

impl Unpin for Trace

impl UnwindSafe for Trace

Blanket Implementations

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impl<T> Any for Twhere
T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for Twhere
T: ?Sized,

const: unstable · source

fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for Twhere
T: ?Sized,

const: unstable · source

fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> From<T> for T

const: unstable · source

fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into for Twhere
U: From<T>,

const: unstable · source

fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> ToOwned for Twhere
T: Clone,

type Owned = T

The resulting type after obtaining ownership.

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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more

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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more

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impl<T, U> TryFrom for Twhere
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

const: unstable · source

fn try_from(value: U) -> Result<T, <T as TryFrom>::Error>

Performs the conversion.

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impl<T, U> TryInto for Twhere
U: TryFrom<T>,

type Error = >::Error

The type returned in the event of a conversion error.

const: unstable · source

fn try_into(self) -> Result<U, >::Error>

Performs the conversion.

Struct block_aligner::scan_block::Trace

Implementations

impl Trace

pub fn cigar(&self, i: usize, j: usize, cigar: &mut Cigar)

pub fn blocks(&self) -> Vec<Rectangle>

Trait Implementations

impl Clone for Trace

fn clone(&self) -> Trace

fn clone_from(&mut self, source: &Self)

Auto Trait Implementations

impl RefUnwindSafe for Trace

impl Send for Trace

impl Sync for Trace

impl Unpin for Trace

impl UnwindSafe for Trace

Blanket Implementations

impl<T> Any for Twhere
T: 'static + ?Sized,

fn type_id(&self) -> TypeId

impl<T> Borrow<T> for Twhere
T: ?Sized,

fn borrow(&self) -> &T

impl<T> BorrowMut<T> for Twhere
T: ?Sized,

fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

fn from(t: T) -> T

impl<T, U> Into<U> for Twhere
U: From<T>,

fn into(self) -> U

impl<T> ToOwned for Twhere
T: Clone,

type Owned = T

fn to_owned(&self) -> T

fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for Twhere
U: Into<T>,

type Error = Infallible

fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for Twhere
U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

impl<V, T> VZip<V> for Twhere
V: MultiLane<T>,

fn vzip(self) -> V

Struct block_aligner::scan_block::Trace

Implementations

impl Trace

pub fn cigar(&self, i: usize, j: usize, cigar: &mut Cigar)

pub fn blocks(&self) -> Vec<Rectangle>

Trait Implementations

impl Clone for Trace

fn clone(&self) -> Trace

fn clone_from(&mut self, source: &Self)

Auto Trait Implementations

impl RefUnwindSafe for Trace

impl Send for Trace

impl Sync for Trace

impl Unpin for Trace

impl UnwindSafe for Trace

Blanket Implementations

impl<T> Any for Twhere T: 'static + ?Sized,

fn type_id(&self) -> TypeId

impl<T> Borrow<T> for Twhere T: ?Sized,

fn borrow(&self) -> &T

impl<T> BorrowMut<T> for Twhere T: ?Sized,

fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

fn from(t: T) -> T

impl<T, U> Into<U> for Twhere U: From<T>,

fn into(self) -> U

impl<T> ToOwned for Twhere T: Clone,

type Owned = T

fn to_owned(&self) -> T

fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for Twhere U: Into<T>,

type Error = Infallible

fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for Twhere U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

impl<V, T> VZip<V> for Twhere V: MultiLane<T>,

fn vzip(self) -> V

impl<T> Any for Twhere
T: 'static + ?Sized,

impl<T> Borrow<T> for Twhere
T: ?Sized,

impl<T> BorrowMut<T> for Twhere
T: ?Sized,

impl<T, U> Into<U> for Twhere
U: From<T>,

impl<T> ToOwned for Twhere
T: Clone,

impl<T, U> TryFrom<U> for Twhere
U: Into<T>,

impl<T, U> TryInto<U> for Twhere
U: TryFrom<T>,

impl<V, T> VZip<V> for Twhere
V: MultiLane<T>,